Items where subject is "Genetics"

2025

Alsheikh, Baker and Attar, Rukset and Güleç Yilmaz, Seda and Yaser Barham, Sara and Bakırezer, Selvi Duman (2025) The role of GPX1 (rs1050450) variants in ovarian cancer susceptibility within a Turkish population. Cancer Control, 32. ISSN 1526-2359

Fatharani, Annisa and Alsayegh, Ali (2025) Pharmacogenomics meets generative AI : transforming clinical trial design with large language models. Journal of Pharmacology and Pharmacotherapeutics. ISSN 0976-5018

Pickard, Benjamin S. (2025) A mechanism of global gene expression regulation is disrupted by multiple disease states and drug treatments. PLOS One, 20 (5). e0317071. ISSN 1932-6203

Stone, Jack W. and Munnoch, John T. and Hoskisson, Paul A. (2025) Whole-genome sequencing of the Streptomyces coelicolor bldA39 mutant (J1700) reveals hundreds of previously unknown mutations. Access Microbiology, 7 (2). ISSN 2516-8290

Zdouc, Mitja M and Blin, Kai and Louwen, Nico L L and Navarro, Jorge and Loureiro, Catarina and Bader, Chantal D and Bailey, Constance B and Barra, Lena and Booth, Thomas J and Bozhüyük, Kenan A J and Cediel-Becerra, José D D and Charlop-Powers, Zachary and Chevrette, Marc G and Chooi, Yit Heng and D'Agostino, Paul M and de Rond, Tristan and Del Pup, Elena and Duncan, Katherine R and Gu, Wenjia and Hanif, Novriyandi and Helfrich, Eric J N and Jenner, Matthew and Katsuyama, Yohei and Korenskaia, Aleksandra and Krug, Daniel and Libis, Vincent and Lund, George A and Mantri, Shrikant and Morgan, Kalindi D and Owen, Charlotte and Phan, Chin-Soon and Philmus, Benjamin and Reitz, Zachary L and Robinson, Serina L and Singh, Kumar Saurabh and Teufel, Robin and Tong, Yaojun and Tugizimana, Fidele and Ulanova, Dana and Winter, Jaclyn M and Aguilar, César and Akiyama, Daniel Y and Al-Salihi, Suhad A A and Alanjary, Mohammad and Alberti, Fabrizio and Aleti, Gajender and Alharthi, Shumukh A and Rojo, Mariela Y Arias and Arishi, Amr A and Augustijn, Hannah E and Avalon, Nicole E and Avelar-Rivas, J Abraham and Axt, Kyle K and Barbieri, Hellen B and Barbosa, Julio Cesar J and Barboza Segato, Lucas Gabriel and Barrett, Susanna E and Baunach, Martin and Beemelmanns, Christine and Beqaj, Dardan and Berger, Tim and Bernaldo-Agüero, Jordan and Bettenbühl, Sandra M and Bielinski, Vincent A and Biermann, Friederike and Borges, Ricardo M and Borriss, Rainer and Breitenbach, Milena and Bretscher, Kevin M and Brigham, Michael W and Buedenbender, Larissa and Bulcock, Brodie W and Cano-Prieto, Carolina and Capela, João and Carrion, Victor J and Carter, Riley S and Castelo-Branco, Raquel and Castro-Falcón, Gabriel and Chagas, Fernanda O and Charria-Girón, Esteban and Chaudhri, Ayesha Ahmed and Chaudhry, Vasvi and Choi, Hyukjae and Choi, Yukyung and Choupannejad, Roya and Chromy, Jakub and Donahey, Melinda S Chue and Collemare, Jérôme and Connolly, Jack A and Creamer, Kaitlin E and Crüsemann, Max and Cruz, Andres Arredondo and Cumsille, Andres and Dallery, Jean-Felix and Damas-Ramos, Luis Caleb and Damiani, Tito and de Kruijff, Martinus and Martín, Belén Delgado and Sala, Gerardo Della and Dillen, Jelle and Doering, Drew T and Dommaraju, Shravan R and Durusu, Suhan and Egbert, Susan and Ellerhorst, Mark and Faussurier, Baptiste and Fetter, Artem and Feuermann, Marc and Fewer, David P and Foldi, Jonathan and Frediansyah, Andri and Garza, Erin A and Gavriilidou, Athina and Gentile, Andrea and Gerke, Jennifer and Gerstmans, Hans and Gomez-Escribano, Juan Pablo and González-Salazar, Luz A and Grayson, Natalie E and Greco, Claudio and Gomez, Juan E Gris and Guerra, Sebastian and Flores, Shaday Guerrero and Gurevich, Alexey and Gutiérrez-García, Karina and Hart, Lauren and Haslinger, Kristina and He, Beibei and Hebra, Teo and Hemmann, Jethro L and Hindra, Hindra and Höing, Lars and Holland, Darren C and Holme, Jonathan E and Horch, Therese and Hrab, Pavlo and Hu, Jie and Huynh, Thanh-Hau and Hwang, Ji-Yeon and Iacovelli, Riccardo and Iftime, Dumitrita and Iorio, Marianna and Jayachandran, Sidharth and Jeong, Eunah and Jing, Jiayi and Jung, Jung J and Kakumu, Yuya and Kalkreuter, Edward and Kang, Kyo Bin and Kang, Sangwook and Kim, Wonyong and Kim, Geum Jin and Kim, Hyunwoo and Kim, Hyun Uk and Klapper, Martin and Koetsier, Robert A and Kollten, Cassandra and Kovács, Ákos T and Kriukova, Yelyzaveta and Kubach, Noel and Kunjapur, Aditya M and Kushnareva, Aleksandra K and Kust, Andreja and Lamber, Jessica and Larralde, Martin and Larsen, Niels J and Launay, Adrien P and Le, Ngoc-Thao-Hien and Lebeer, Sarah and Lee, Byung Tae and Lee, Kyungha and Lev, Katherine L and Li, Shu-Ming and Li, Yong-Xin and Licona-Cassani, Cuauhtémoc and Lien, Annette and Liu, Jing and Lopez, Julius Adam V and Machushynets, Nataliia V and Macias, Marla I and Mahmud, Taifo and Maleckis, Matiss and Martinez-Martinez, Añadir Maharai and Mast, Yvonne and Maximo, Marina F and McBride, Christina M and McLellan, Rose M and Bhatt, Khyati Mehta and Melkonian, Chrats and Merrild, Aske and Metsä-Ketelä, Mikko and Mitchell, Douglas A and Müller, Alison V and Nguyen, Giang-Son and Nguyen, Hera T and Niedermeyer, Timo H J and O'Hare, Julia H and Ossowicki, Adam and Ostash, Bohdan O and Otani, Hiroshi and Padva, Leo and Paliyal, Sunaina and Pan, Xinya and Panghal, Mohit and Parade, Dana S and Park, Jiyoon and Parra, Jonathan and Rubio, Marcos Pedraza and Pham, Huong T and Pidot, Sacha J and Piel, Jörn and Pourmohsenin, Bita and Rakhmanov, Malik and Ramesh, Sangeetha and Rasmussen, Michelle H and Rego, Adriana and Reher, Raphael and Rice, Andrew J and Rigolet, Augustin and Romero-Otero, Adriana and Rosas-Becerra, Luis Rodrigo and Rosiles, Pablo Y and Rutz, Adriano and Ryu, Byeol and Sahadeo, Libby-Ann and Saldanha, Murrel and Salvi, Luca and Sánchez-Carvajal, Eduardo and Santos-Medellin, Christian and Sbaraini, Nicolau and Schoellhorn, Sydney M and Schumm, Clemens and Sehnal, Ludek and Selem, Nelly and Shah, Anjali D and Shishido, Tania K and Sieber, Simon and Silviani, Velina and Singh, Garima and Singh, Hemant and Sokolova, Nika and Sonnenschein, Eva C and Sosio, Margherita and Sowa, Sven T and Steffen, Karin and Stegmann, Evi and Streiff, Alena B and Strüder, Alena and Surup, Frank and Svenningsen, Tiziana and Sweeney, Douglas and Szenei, Judit and Tagirdzhanov, Azat and Tan, Bin and Tarnowski, Matthew J and Terlouw, Barbara R and Rey, Thomas and Thome, Nicola U and Torres Ortega, Laura Rosina and Tørring, Thomas and Trindade, Marla and Truman, Andrew W and Tvilum, Marie and Udwary, Daniel W and Ulbricht, Christoph and Vader, Lisa and van Wezel, Gilles P and Walmsley, Max and Warnasinghe, Randika and Weddeling, Heiner G and Weir, Angus N M and Williams, Katherine and Williams, Sam E and Witte, Thomas E and Rocca, Steffaney M Wood and Yamada, Keith and Yang, Dong and Yang, Dongsoo and Yu, Jingwei and Zhou, Zhenyi and Ziemert, Nadine and Zimmer, Lukas and Zimmermann, Alina and Zimmermann, Christian and van der Hooft, Justin J J and Linington, Roger G and Weber, Tilmann and Medema, Marnix H (2025) MIBiG 4.0 : advancing biosynthetic gene cluster curation through global collaboration. Nucleic Acids Research, 53 (D1). D678–D690. ISSN 1362-4962

2024

Al Asad, Mamun and Shuvo, Md Sarower Hossen and Mitu, Shomaia Yasmin and Sumia and Zihadi, Md Asief Hossain and Shanta, Ayasha Siddique and Islam, Nahidul and Nahar, Shamsun and Godman, Brian and Islam, Salequl (2024) Culture-independent quantitative PCR detected mobilized colistin resistance genes (mcr-1, mcr-2, mcr-3, mcr-4, and mcr-5) in chicken-gut contents in Bangladesh. Sci, 6 (4). 76. ISSN 2413-4155

Kara, Hesna and Axer, Alexander and Muskett, Frederick W. and Bueno-Alejo, Carlos J. and Paschalis, Vasileios and Taladriz-Sender, Andrea and Tubasum, Sumera and Vega, Marina Santana and Zhao, Zhengyun and Clark, Alasdair W. and Hudson, Andrew J. and Eperon, Ian C. and Burley, Glenn A. and Dominguez, Cyril (2024) 2′-19 F labelling of ribose in RNAs : a tool to analyse RNA/protein interactions by NMR in physiological conditions. Frontiers in Molecular Biosciences, 11. 1325041. ISSN 2296-889X

Ononamadu, Chimaobi J. and Seidel, Veronique (2024) Exploring the antidiabetic potential of Salvia officinalis using network pharmacology, molecular docking and ADME/drug-likeness predictions. Plants, 13 (20). 2892. ISSN 2223-7747

Taglini, Francesca and Kafetzopoulos, Ioannis and Rolls, Willow and Musialik, Kamila Irena and Lee, Heng Yang and Zhang, Yujie and Marenda, Mattia and Kerr, Lyndsay and Finan, Hannah and Rubio-Ramon, Cristina and Gautier, Philippe and Wapenaar, Hannah and Kumar, Dhananjay and Davidson-Smith, Hazel and Wills, Jimi and Murphy, Laura C. and Wheeler, Ann and Wilson, Marcus D. and Sproul, Duncan (2024) DNMT3B PWWP mutations cause hypermethylation of heterochromatin. EMBO Reports, 25 (3). pp. 1130-1155. ISSN 1469-3178

Weissgold, Lily and Switzer, Stephanie and Eccleston-Turner, Mark and Scholz, Amber (2024) A technical and legal analysis of triggers for monetary benefit-sharing from digital sequence information on genetic resources : A Report for the European Commission, Joint Research Centre. Publications Office of the European Union.

Wiejak, Jolanta and Murphy, Fiona A. and Barker, Graeme and Maffia, Pasquale and Yarwood, Stephen J. (2024) Non-cyclic nucleotide EPAC1 activators suppress lipopolysaccharide-regulated gene expression, signalling and intracellular communication in differentiated macrophage-like THP-1 cells. Cellular Signalling, 124. 111444. ISSN 1873-3913

2023

Davidson, Callum and Abdulrahman, Rand and Punnabhum, Panida and Perrie, Yvonne and Rattray, Zahra (2023) Orthogonal pipelines for lipid nanoparticle evaluation. In: SciX 2023, 2023-10-08 - 2023-10-13.

Kerr, Lyndsay and Kafetzopoulos, Ioannis and Grima, Ramon and Sproul, Duncan (2023) Genome-wide single-molecule analysis of long-read DNA methylation reveals heterogeneous patterns at heterochromatin that reflect nucleosome organisation. PLOS Genetics, 19 (10). e1010958. ISSN 1553-7390

2022

Higham, Jonathan and Kerr, Lyndsay and Zhang, Qian and Walker, Rosie M. and Harris, Sarah E. and Howard, David M. and Hawkins, Emma L. and Sandu, Anca-Larisa and Steele, J. Douglas and Waiter, Gordon D. and Murray, Alison D. and Evans, Kathryn L. and McIntosh, Andrew M. and Visscher, Peter M. and Deary, Ian J. and Cox, Simon R. and Sproul, Duncan (2022) Local CpG density affects the trajectory and variance of age-associated DNA methylation changes. Genome Biology, 23. 216. ISSN 1465-6906

Rodriguez-Rodriguez, Noe and Clark, Paula A. and Gogoi, Mayuri and Ferreira, Ana C. F. and Kerscher, Bernhard and Crisp, Alastair and Jolin, Helen E. and Murphy, Jane E. and Sivasubramaniam, Meera and Pedro, Luisa and Walker, Jennifer A. and Heycock, Morgan W. D. and Shields, Jacqueline D. and Barlow, Jillian L. and McKenzie, Andrew N. J. (2022) Identification of aceNKPs, a committed common progenitor population of the ILC1 and NK cell continuum. Proceedings of the National Academy of Sciences of the United States of America, 119 (49). e2203454119. ISSN 0027-8424

2021

Dasgupta, Asish and Chen, Kuang-Hueih and Lima, Patricia D.A. and Mewburn, Jeffrey and Wu, Danchen and Al-Qazazi, Ruaa and Jones, Oliver and Tian, Lian and Potus, Francois and Bonnet, Sebastien and Archer, Stephen L. (2021) PINK1-induced phosphorylation of mitofusin 2 at serine 442 causes its proteasomal degradation and promotes cell proliferation in lung cancer and pulmonary arterial hypertension. FASEB Journal, 35 (8). e21771. ISSN 0892-6638

Goswami, Cosmika and Fox, Stephen and Holden, Matthew and Leanord, Alistair and Evans, Thomas J. (2021) Genomic analysis of global Staphylococcus argenteus strains reveals distinct lineages with differing virulence and antibiotic resistance gene content. Frontiers in Microbiology, 12. 795173. ISSN 1664-302X

Humphrey, Suzanne and Fillol-Salom, Alfred and Quiles-Puchalt, Nuria and Ibarra-Chávez, Rodrigo and Haag, Andreas F. and Chen, John and Penadés, José R. (2021) Bacterial chromosomal mobility via lateral transduction exceeds that of classical mobile genetic elements. Nature Communications, 12. 6509. ISSN 2041-1723

Huszar, Tunde I. and Gettings, Katherine B. and Vallone, Peter M. (2021) An introductory overview of open-source and commercial software options for the analysis of forensic sequencing data. Genes, 12 (11). 1739. ISSN 2073-4425

Klein, Brennan and Holmér, Ludvig and Smith, Keith M. and Johnson, Mackenzie M. and Swain, Anshuman and Stolp, Laura and Teufel, Ashley I. and Kleppe, April S. (2021) A computational exploration of resilience and evolvability of protein–protein interaction networks. Communications Biology, 4. 1352. ISSN 2399-3642

McDonald, Iain (2021) Improved models of coalescence ages of Y-DNA haplogroups. Genes, 12 (6). 862. ISSN 2073-4425

Schorn, Michelle A. and Verhoeven, Stefan and Ridder, Lars and Huber, Florian and Acharya, Deepa D. and Aksenov, Alexander A. and Aleti, Gajender and Moghaddam, Jamshid Amiri and Aron, Allegra T. and Aziz, Saefuddin and Bauermeister, Anelize and Bauman, Katherine D. and Baunach, Martin and Beemelmanns, Christine and Beman, J. Michael and Berlanga-Clavero, María Victoria and Blacutt, Alex A. and Bode, Helge B. and Boullie, Anne and Brejnrod, Asker and Bugni, Tim S. and Calteau, Alexandra and Cao, Liu and Carrión, Víctor J. and Castelo-Branco, Raquel and Chanana, Shaurya and Chase, Alexander B. and Chevrette, Marc G. and Costa-Lotufo, Leticia V. and Crawford, Jason M. and Currie, Cameron R. and Cuypers, Bart and Dang, Tam and de Rond, Tristan and Demko, Alyssa M. and Dittmann, Elke and Du, Chao and Drozd, Christopher and Dujardin, Jean-Claude and Dutton, Rachel J. and Edlund, Anna and Fewer, David P. and Garg, Neha and Gauglitz, Julia M. and Gentry, Emily C. and Gerwick, Lena and Glukhov, Evgenia and Gross, Harald and Gugger, Muriel and Guillén Matus, Dulce G. and Helfrich, Eric J. N. and Hempel, Benjamin-Florian and Hur, Jae-Seoun and Iorio, Marianna and Jensen, Paul R. and Kang, Kyo Bin and Kaysser, Leonard and Kelleher, Neil L. and Kim, Chung Sub and Kim, Ki Hyun and Koester, Irina and König, Gabriele M. and Leao, Tiago and Lee, Seoung Rak and Lee, Yi-Yuan and Li, Xuanji and Little, Jessica C. and Maloney, Katherine N. and Männle, Daniel and Martin H., Christian and McAvoy, Andrew C. and Metcalf, Willam W. and Mohimani, Hosein and Molina-Santiago, Carlos and Moore, Bradley S. and Mullowney, Michael W. and Muskat, Mitchell and Nothias, Louis-Félix and O'Neill, Ellis C. and Parkinson, Elizabeth I. and Petras, Daniel and Piel, Jörn and Pierce, Emily C. and Pires, Karine and Reher, Raphael and Romero, Diego and Roper, M. Caroline and Rust, Michael and Saad, Hamada and Saenz, Carmen and Sanchez, Laura M. and Sørensen, Søren Johannes and Sosio, Margherita and Süssmuth, Roderich D. and Sweeney, Douglas and Tahlan, Kapil and Thomson, Regan J. and Tobias, Nicholas J. and Trindade-Silva, Amaro E. and van Wezel, Gilles P. and Wang, Mingxun and Weldon, Kelly C. and Zhang, Fan and Ziemert, Nadine and Duncan, Katherine R. and Crüsemann, Max and Rogers, Simon and Dorrestein, Pieter C. and Medema, Marnix H. and van der Hooft, Justin J. J. (2021) A community resource for paired genomic and metabolomic data mining. Nature Chemical Biology, 17 (4). pp. 363-368. ISSN 1552-4450

Zhang, Huayu and Ferguson, Amy and Robertson, Grant and Jiang, Muchen and Zhang, Teng and Sudlow, Cathie and Smith, Keith and Rannikmae, Kristiina and Wu, Honghan (2021) Benchmarking network-based gene prioritization methods for cerebral small vessel disease. Briefings in Bioinformatics, 22 (5). bbab006. ISSN 1467-5463

2020

Fox, Stephen and Goswami, Cosmika and Holden, Matthew and Connolly, James P.R. and Mordue, James and O’Boyle, Nicky and Roe, Andrew and Connor, Martin and Leanord, Alistair and Evans, Tom J. (2020) A highly conserved complete accessory Escherichia coli type III secretion system 2 is widespread in bloodstream isolates of the ST69 lineage. Scientific Reports, 10. 4135. ISSN 2045-2322

Goswami, Cosmika and Fox, Stephen and Holden, Matthew T.G. and Connor, Martin and Leanord, Alistair and Evans, Thomas J. (2020) Origin, maintenance and spread of antibiotic resistance genes within plasmids and chromosomes of bloodstream isolates of Escherichia coli. Microbial Genomics, 6 (4). 000353. ISSN 2057-5858

Holmes, Ashleigh and Pritchard, Leighton and Hedley, Peter E. and Morris, Jenny and McAteer, Sean P. and Gally, David L. and Holden, Nicola J. (2020) A high-throughput genomic screen identifies a role for the plasmid-borne type II secretion system of Escherichia coli O157:H7 (Sakai) in plant-microbe interactions. Genomics, 112 (6). pp. 4242-4253. ISSN 1089-8646

2018

Chen, Leo and Liversidge, Helen and Chen, Ke and Farella, Mauro and Sassani, Sadaf and Patel, Dilan and Al-Ani, Azza and Brook, Alan (2018) Delay in dental development and variations in root morphology are outcomes of the complex adaptive system associated with the numerical variation of hypodontia. International Journal of Design and Nature and Ecodynamics, 13 (1). pp. 101-106. ISSN 1755-7445

Goswami, Cosmika and Fox, Stephen and Holden, Matthew and Connor, Martin and Leanord, Alistair and Evans, Thomas J. (2018) Genetic analysis of invasive Escherichia coli in Scotland reveals determinants of healthcare-associated versus community-acquired infections. Microbial Genomics, 4 (6). 000190. ISSN 2057-5858

Horesh, Gal and Harms, Alexander and Fino, Cinzia and Parts, Leopold and Gerdes, Kenn and Heinz, Eva and Thomson, Nicholas Robert (2018) SLING : a tool to search for linked genes in bacterial datasets. Nucleic Acids Research, 46 (21). e128. ISSN 1362-4962

Padroni, Giacomo and Parkinson, John A. and Fox, Keith R. and Burley, Glenn A. (2018) Structural basis of DNA duplex distortion induced by thiazole-containing hairpin polyamides. Nucleic Acids Research, 46 (1). pp. 42-53. ISSN 1362-4962

2017

Alshehhi, Suaad and McCallum, Nicola A. and Haddrill, Penelope R. (2017) Quantification of RNA degradation of blood-specific markers to indicate the age of bloodstains. Forensic Science International: Genetics Supplement Series, 6. e453-e455. ISSN 1875-1768

Fuentes-Utrilla, P. and Goswami, C. and Cottrell, J. E. and Pong-Wong, R. and Law, A. and A’Hara, S. W. and Lee, S. J. and Woolliams, J. A. (2017) QTL analysis and genomic selection using RADseq derived markers in Sitka spruce : the potential utility of within family data. Tree Genetics and Genomes, 13 (2). 33. ISSN 1614-2950

Grosse-Kock, Steffan and Kolodkina, Valentina and Schwalbe, Edward C. and Blom, Jochen and Burkovski, Andreas and Hoskisson, Paul A. and Brisse, Sylvain and Smith, Darren and Sutcliffe, Iain C. and Titov, Leonid and Sangal, Vartul (2017) Genomic analysis of endemic clones of toxigenic and non-toxigenic Corynebacterium diphtheriae in Belarus during and after the major epidemic in 1990s. BMC Genomics, 18. ISSN 1471-2164

Jackson, Benjamin C. and Campos, José L. and Haddrill, Penelope R. and Charlesworth, Brian and Zeng, Kai (2017) Variation in the intensity of selection on codon bias over time causes contrasting patterns of base composition evolution in Drosophila. Genome Biology and Evolution, 9 (1). pp. 102-123. ISSN 1759-6653

Raghupathy, Rakesh K. and Zhang, Xun and Liu, Fei and Alhasani, Reem H. and Biswas, Lincoln and Akhtar, Saeed and Pan, Luyuan and Moens, Cecilia B. and Li, Wenchang and Liu, Mugen and Kennedy, Breandan N. and Shu, Xinhua (2017) Rpgrip1 is required for rod outer segment development and ciliary protein trafficking in zebrafish. Scientific Reports, 7. 16881. ISSN 2045-2322

Schniete, Jana K. and Salih, Talal S. and Algora-Gallardo, Lis and Santos, Tiago and Filgueira-Martinez, Sara and Herron, Paul R. (2017) Draft genome sequence of Streptomyces phaeoluteigriseus DSM41896. Genome Announcements, 5 (21). e00371-17. ISSN 2169-8287

de Vries, Stefan P. and Gupta, Srishti and Baig, Abiyad and Wright, Elli and Wedley, Amy and Jensen, Annette Nygaard and Lora, Lizeth LaCharme and Humphrey, Suzanne and Skovgård, Henrik and Macleod, Kareen and Pont, Elsa and Wolanska, Dominika P. and L'Heureux, Joanna and Mobegi, Fredrick M. and Smith, David G.E. and Everest, Paul and Zomer, Aldert and Williams, Nicola and Wigley, Paul and Humphrey, Thomas and Maskell, Duncan J. and Grant, Andrew J. (2017) Genome-wide fitness analyses of the foodborne pathogen Campylobacter jejuni in in vitro and in vivo models. Scientific Reports, 7. 1251. ISSN 2045-2322

2016

Vicente, Claudia S.L. and Nascimento, Francisco X. and Ikuyo, Yoriko and Cock, Peter J.A. and Mota, Manuel and Hasegawa, Koichi (2016) The genome and genetics of a high oxidative stress tolerant Serratia sp. LCN16 isolated from the plant parasitic nematode Bursaphelenchus xylophilus. BMC Genomics, 17. 301. ISSN 1471-2164

2015

Bergman, Casey M. and Haddrill, Penelope R (2015) Strain-specific and pooled genome sequences for populations of Drosophila melanogaster from three continents. F1000Research, 4 (31).

Freschi, Luca and Jeukens, Julie and Kukavica-Ibrulj, Irena and Boyle, Brian and Dupont, Marie-Josée and Laroche, Jérôme and Larose, Stéphane and Maaroufi, Halim and Fothergill, Joanne L. and Moores, Matthew and Winsor, Geoffrey L. and Aaron, Shawn D. and Barbeau, Jean and Bell, Scott C. and Burns, Jane L. and Camara, Miguel and Cantin, André and Charette, Steve J. and Dewar, Ken and Déziel, Éric and Grimwood, Keith and Hancock, Robert E. W. and Harrison, Joe J. and Heeb, Stephan and Jelsbak, Lars and Jia, Baofeng and Kenna, Dervla T. and Kidd, Timothy J. and Klockgether, Jens and Lam, Joseph S. and Lamont, Iain L. and Lewenza, Shawn and Loman, Nick and Malouin, François and Manos, Jim and McArthur, Andrew G. and McKeown, Josie and Milot, Julie and Naghra, Hardeep and Nguyen, Dao and Pereira, Sheldon K. and Perron, Gabriel G. and Pirnay, Jean-Paul and Rainey, Paul B. and Rousseau, Simon and Santos, Pedro M. and Stephenson, Anne and Taylor, Véronique and Turton, Jane F. and Waglechner, Nicholas and Williams, Paul and Thrane, Sandra W. and Wright, Gerard D. and Brinkman, Fiona S. L. and Tucker, Nicholas P. and Tümmler, Burkhard and Winstanley, Craig and Levesque, Roger C. (2015) Clinical utilization of genomics data produced by the international Pseudomonas aeruginosa consortium. Frontiers in Microbiology, 6. 1036. ISSN 1664-302X

Houslay, Miles (2015) Hypertension linked to PDE3A activation. Nature Genetics, 47 (6). pp. 562-563. ISSN 1061-4036

Patnaik, Sarita Rani and Raghupathy, Rakesh Kotapati and Zhang, Xun and Mansfield, David and Shu, Xinhua (2015) The role of RPGR and its interacting proteins in ciliopathies. Journal of Ophthalmology, 2015. 414781. ISSN 2090-004X

Simpson, Nuala H and Ceroni, Fabiola and Reader, Rose H and Covill, Laura E and Knight, Julian C and Hennessy, Elizabeth R and Bolton, Patrick F and Conti-Ramsden, Gina and O'Hare, Anne and Baird, Gillian and Fisher, Simon E and Newbury, Dianne F and Nudel, R and Monaco, AP and Simonoff, E and Bolton, PF and Pickles, A and Slonims, V and Dworzynski, K and Everitt, A and Clark, A and Watson, J and Seckl, J and Cowie, H and Cohen, W and Nasir, J. and Bishop, DVM and Simkin, Z (2015) Genome-wide analysis identifies a role for common copy number variants in specific language impairment. European Journal of Human Genetics, 23 (10). pp. 1370-1377. ISSN 1018-4813

Tate, Rothwelle and Rotondo, Dino and Davidson, Jillian (2015) Regulation of lipid metabolism by microRNAs. Current Opinion in Lipidology, 26 (3). pp. 243-244. ISSN 0957-9672

Villanueva, Pía and Nudel, Ron and Hoischen, Alexander and Fernández, María Angélica and Simpson, Nuala H. and Gilissen, Christian and Reader, Rose H. and Jara, Lillian and Echeverry, Maria Magdalena and Francks, Clyde and Baird, Gillian and Conti-Ramsden, Gina and O’Hare, Anne and Bolton, Patrick F. and Hennessy, Elizabeth R. and Palomino, Hernán and Carvajal-Carmona, Luis and Veltman, Joris A. and Cazier, Jean Baptiste and De Barbieri, Zulema and Fisher, Simon E. and Newbury, Dianne F. and Slonims, V. and Clark, Ann and Watson, Jocelynne and Simonoff, E. and Pickles, A. and Everitt, A. and Seckl, J. and Cowie, H. and Cohen, W. and Nasir, J. and Bishop, D. V M and Simkin, Z. (2015) Exome sequencing in an admixed isolated population indicates NFXL1 variants confer a risk for specific language impairment. PLOS Genetics, 11 (3). e1004925. ISSN 1553-7390

2014

McGinty, Sean (2014) A decade of modelling drug release from arterial stents. Mathematical Biosciences, 257. pp. 80-90. ISSN 0025-5564

Morris, B.J. and Pratt, J.A. (2014) Novel treatment strategies for schizophrenia from improved understanding of genetic risk. Clinical Genetics, 86 (5). pp. 401-411. ISSN 0009-9163

2013

Campos, Jose L and Zeng, Kai and Parker, Darren J and Charlesworth, Brian and Haddrill, Penelope R (2013) Codon usage bias and effective population sizes on the X chromosome versus the autosomes in Drosophila melanogaster. Molecular Biology and Evolution, 30 (4). pp. 811-823.

Devaurs, Didier and Bouard, Léa and Vaisset, Marc and Zanon, Christophe and Al-Bluwi, Ibrahim and Iehl, Romain and Siméon, Thierry and Cortés, Juan (2013) MoMA-LigPath : a web server to simulate protein-ligand unbinding. Nucleic Acids Research, 41 (W1). W297-W302. ISSN 1362-4962

2012

Campos, José L and Charlesworth, Brian and Haddrill, Penelope R (2012) Molecular evolution in nonrecombining regions of the Drosophila melanogaster genome. Genome Biology and Evolution, 4 (3). pp. 278-288.

2011

Kikuchi, Taisei and Cotton, James A. and Dalzell, Jonathan J. and Hasegawa, Koichi and Kanzaki, Natsumi and McVeigh, Paul and Takanashi, Takuma and Tsai, Isheng J. and Assefa, Samuel A. and Cock, Peter J.A. and Da Otto, Thomasn and Hunt, Martin and Reid, Adam J. and Sanchez-Flores, Alejandro and Tsuchihara, Kazuko and Yokoi, Toshiro and Larsson, Mattias C. and Miwa, Johji and Maule, Aaron G. and Sahashi, Norio and Jones, John T. and Berriman, Matthew (2011) Genomic insights into the origin of parasitism in the emerging plant pathogen bursaphelenchus xylophilus. PLOS Pathogens, 7 (9). e1002219. ISSN 1553-7366

Nowell, Reuben W and Charlesworth, Brian and Haddrill, Penelope R (2011) Ancestral polymorphisms in Drosophila pseudoobscura and Drosophila miranda. Genetics Research, 93 (4). pp. 255-263.

Thanakiatkrai, Phuvadol and Welch, Lindsey (2011) Evaluation of nucleosome forming potentials (NFPs) of forensically important STRs. Forensic Science International: Genetics, 5 (4). pp. 285-290. ISSN 1872-4973

2010

Haddrill, Penelope R and Loewe, Laurence and Charlesworth, Brian (2010) Estimating the parameters of selection on nonsynonymous mutations in Drosophila pseudoobscura and D. miranda. Genetics, 185 (4). pp. 1381-1396.

Koppu, Swati and Oh, Yew Jinn and Edrada-Ebel, R. and Blatchford, David R. and Tetley, L. and Tate, R. and Dufès, Christine (2010) Tumor regression after systemic administration of a novel tumor-targeted gene delivery system carrying a therapeutic plasmid DNA. Journal of Controlled Release, 143 (2). pp. 215-221. ISSN 0168-3659

Tucker, Nick and Ghosh, T. and Bush, M. and Zhang, X. and Dixon, Ray (2010) Essential roles of three enhancer sites in sigma-54-dependent transcription by the nitric oxide sensing regulatory protein NorR. Nucleic Acids Research, 38 (4). pp. 1182-1194. ISSN 1362-4962

2009

Boonseub, Sansook and Tobe, Shanan S. and Linacre, Adrian M.T. (2009) The use of mitochondrial DNA genes to identify closely related avian species. Forensic Science International: Genetics Supplement Series, 2 (1). pp. 275-277. ISSN 1875-1768

Scottish Government (Funder); Fraser, Jim. (2009) Acquisition and retention of DNA and fingerprint data in Scotland. Unknown Publisher.

Hoskisson, P. and Rigali, S.; Laskin, A.I. and Sariaslani, S. and Gadd, G.M., eds. (2009) Variation in form and function: the helix-turn-helix regulators of the GntR superfamily. In: Advances in Applied Microbiology. Advances in Applied Microbiology, 69 . Elsevier, pp. 1-22. ISBN 9780123748249

Hunsicker, A. and Steber, M. and Mayer, G. and Meitert, J. and Klotzsche, M. and Blind, M. and Hillen, W. and Berens, C. (2009) An RNA Aptamer that Induces Transcription. Chemistry and Biology, 16. pp. 173-180. ISSN 1074-5521

Jayapal, P. and Mayer, G. and Heckel, A. and Wennmohs, F. (2009) Structure-Activity Relationships of a Caged Thrombin-Binding DNA Aptamer: Insight gained from molecular dynamics simulation studies. Journal of Structural Biology, 166 (3). pp. 241-250. ISSN 1047-8477

Kitpipit, Thitika and Linacre, Adrian and Tobe, Shanan S. (2009) Tiger species identification based on molecular approach. Forensic Science International: Genetics Supplement Series, 2 (1). pp. 310-312. ISSN 1875-1768

Knight, Helen M and Pickard, Benjamin S and Maclean, Alan and Malloy, Mary P and Soares, Dinesh C and McRae, Allan F and Condie, Alison and White, Angela and Hawkins, William and McGhee, Kevin and van Beck, Margaret and MacIntyre, Donald J and Starr, John M and Deary, Ian J and Visscher, Peter M and Porteous, David J and Cannon, Ronald E and St Clair, David and Muir, Walter J and Blackwood, Douglas H R (2009) A cytogenetic abnormality and rare coding variants identify ABCA13 as a candidate gene in schizophrenia, bipolar disorder, and depression. American Journal of Human Genetics, 85 (6). pp. 833-846. ISSN 0002-9297

Mayer, G. and Faulhammer, D. and Grättinger, M. and Fessele, S. and Blind, M. (2009) A RNA-based approach towards small molecule inhibitors. Chembiochem, 10 (12). pp. 1993-1996. ISSN 1439-4227

Tobe, Shanan S. and Kitchener, Andrew and Linacre, Adrian (2009) Cytochrome b or cytochrome c oxidase subunit I for mammalian species identification—An answer to the debate. Forensic Science International: Genetics Supplement Series, 2 (1). pp. 306-307. ISSN 1875-1768

2008

Dijkhuizen, L. and Goodfellow, Mike and Hoskisson, P. and Sutcliffe, I. (2008) Actinomycetologists: a vibrant and strong scientific community. Papers from the 14th International Symposium on the Biology of Actinomycetes. Antonie van Leeuwenhoek, 94 (1). pp. 1-2. ISSN 0003-6072

Lee, J.C.I. and Tsai, L.C. and Huang, M.T. and Jhuang, J.A. and Yao, C.T. and Chin, S.C. and Wang, L.C. and Linacre, A.M.T. (2008) A novel strategy for avian species identification by cytochrome B gene. Electrophoresis, 29 (11). pp. 2413-2418. ISSN 0173-0835

Stone, J.L. and O'Donovan, M.C. and Gurling, H. and Kirov, G.K. and Blackwood, D.H.R. and Corvin, A. and Craddock, N.J. and Gill, M. and Pickard, B.S., The International Schizophrenia Consortium (2008) Rare chromosomal deletions and duplications increase risk of schizophrenia. Nature, 455 (7210). pp. 237-241. ISSN 0028-0836

Tobe, Shanan S. and Linacre, Adrian (2008) Quantification of trace amounts of human and non-human mitochondrial DNA (mtDNA) using SYBR Green and real time PCR. Forensic Science International: Genetics Supplement Series, 1 (1). pp. 71-73. ISSN 1875-1768

Tobe, Shanan S. and Linacre, Adrian (2008) A method to identify a large number of mammalian species in the UK from trace samples and mixtures without the use of sequencing. Forensic Science International: Genetics Supplement Series, 1 (1). pp. 625-627. ISSN 1875-1768

Tobe, Shanan S. and Linacre, Adrian M.T. (2008) A technique for the quantification of human and non-human mammalian mitochondrial DNA copy number in forensic and other mixtures. Forensic Science International: Genetics, 2 (4). pp. 249-256. ISSN 1872-4973

Uchegbu, I.F. and Dufès, Christine M. and Kan, Pei Lee and Schätzlein, A.G.; Templeton, Nancy Smyth, ed. (2008) Polymers and dendrimers for gene delivery in gene therapy. In: Gene and cell therapy: therapeutic mechanisms and strategies 3rd ed. CRC Press, pp. 321-339. ISBN 978-0-8493-8768-5

Vicoso, Beatriz and Haddrill, Penelope R and Charlesworth, Brian (2008) A multispecies approach for comparing sequence evolution of X-linked and autosomal sites in Drosophila. Genetics Research, 90 (5). pp. 421-431.

2007

Haddrill, Penelope R and Halligan, Daniel L and Tomaras, Dimitris and Charlesworth, Brian (2007) Reduced efficacy of selection in regions of the Drosophila genome that lack crossing over. Genome Biology, 8 (2). R18. ISSN 1465-6906

Pickard, B. S. and Thomson, P. A. and Christoforou, A. and Evans, K. L. and Morris, S. W. and Porteous, D. J. and Blackwood, D. H. and Muir, W. J. (2007) The PDE4B gene confers sex-specific protection against schizophrenia. Psychiatric Genetics, 17. pp. 129-133. ISSN 0955-8829

2006

Adie, E. A. and Adams, R. R. and Evans, K. L. and Porteous, D. J. and Pickard, B. S. (2006) SUSPECTS : enabling fast and effective prioritization of positional candidates. Bioinformatics, 22 (6). pp. 773-774. ISSN 1367-4811

Muir, Walter J. and Pickard, Benjamin S. and Blackwood, Douglas H.R. (2006) Chromosomal abnormalities and psychosis. British Journal of Psychiatry, 188 (6). pp. 501-503. ISSN 0007-1250

Nasir, Jamal and Frima, Nafsika and Pickard, Ben and Malloy, M. Pat and Zhan, Lingping and Grunewald, Richard (2006) Unbalanced whole arm translocation resulting in loss of 18p in dystonia. Movement Disorders, 21 (6). pp. 859-863. ISSN 0885-3185

Pickard, Benjamin S. and Pieper, Andrew A. and Porteous, David J. and Blackwood, Douglas H. and Muir, Walter J. (2006) The NPAS3 gene--emerging evidence for a role in psychiatric illness. Annals of medicine, 38 (6). pp. 439-448. ISSN 1365-2060

Richards, Thomas A and Dacks, Joel B and Campbell, Samantha A and Blanchard, Jeffrey L and Foster, Peter G and McLeod, Rima and Roberts, Craig W (2006) Evolutionary origins of the eukaryotic shikimate pathway : gene fusions, horizontal gene transfer, and endosymbiotic replacements. Eukaryotic cell, 5 (9). pp. 1517-1531. ISSN 1535-9778

2005

Haddrill, Penelope R and Charlesworth, Brian and Halligan, Daniel L and Andolfatto, Peter (2005) Patterns of intron sequence evolution in Drosophila are dependent upon length and GC content. Genome Biology, 6 (8). R67. ISSN 1465-6906

Haddrill, Penelope R and Thornton, Kevin R and Charlesworth, Brian and Andolfatto, Peter (2005) Multilocus patterns of nucleotide variability and the demographic and selection history of drosophila melanogaster populations. Genome Research, 15 (6). pp. 790-799. ISSN 1088-9051

Millar, J. Kirsty and Pickard, Benjamin S. and Mackie, Shaun and James, Rachel and Christie, Sheila and Buchanan, Sebastienne R. and Malloy, M. Pat and Chubb, Jennifer E. and Huston, Elaine and Baillie, George S. and Thomson, Pippa A. and Hill, Elaine V. and Brandon, Nicholas J. and Rain, Jean-Christophe and Camargo, L. Miguel and Whiting, Paul J. and Houslay, Miles D. and Blackwood, Douglas H. R. and Muir, Walter J. and Porteous, David J. (2005) DISC1 and PDE4B are interacting genetic factors in schizophrenia that regulate cAMP signaling. Science, 310 (5751). pp. 1187-1191. ISSN 1095-9203

Pickard, Ben S. and Malloy, M. Pat and Clark, Leanne and Lehellard, Stéphanie and Ewald, Henrik L. and Mors, Ole and Porteous, David J. and Blackwood, Douglas H. R. and Muir, Walter J. (2005) Candidate psychiatric illness genes identified in patients with pericentric inversions of chromosome 18. Psychiatric Genetics, 15 (1). pp. 37-44. ISSN 0955-8829

2004

Pickard, Ben S and Hollox, Edward J and Malloy, M Pat and Porteous, David J and Blackwood, Douglas HR and Armour, John AL and Muir, Walter J (2004) A 4q35.2 subtelomeric deletion identified in a screen of patients with co-morbid psychiatric illness and mental retardation. BMC Medical Genetics, 5 (21). 21. ISSN 1471-2350

2003

Porteous, D.J. and Evans, K.L. and Millar, J.K. and Pickard, B.S. and Thomson, P.A. and James, R. and MacGregor, S. and Wray, N.R. and Visscher, P.M. and Muir, W.J. and Blackwood, D.H. (2003) Genetics of schizophrenia and bipolar affective disorder: strategies to identify candidate genes. Cold Spring Harbor symposia on quantitative biology, 68. pp. 383-394. ISSN 1943-4456

2001

Valenza-Schaerly, Pascale and Pickard, Benjamin and Walter, Jörn and Jung, Martin and Pourcel, Lucille and Reik, Wolf and Gauguier, Dominique and Vergnaud, Gilles and Pourcel, Christine (2001) A dominant modifier of transgene methylation is mapped by QTL analysis to mouse chromosome 13. Genome Research, 11 (3). pp. 382-388. ISSN 1088-9051

1998

Constância, Miguel and Pickard, Benjamin and Kelsey, Gavin and Reik, Wolf (1998) Imprinting mechanisms. Genome Research, 8 (9). pp. 881-900. ISSN 1088-9051

1993

Echevarria, F.A.M. and Gettinby, G. and Hazelwood, S. (1993) Model predictions for anthelmintic resistance amongst Haemonchus contortus populations in southern Brazil. Veterinary Parasitology, 47 (3-4). pp. 315-325. ISSN 0304-4017

1991

Ducancel, F. and Rowan, E.G. and Cassar, E. and Harvey, A.L. and Menez, A. and Boulain, J.C. (1991) Amino acid sequence of a muscarinic toxin deduced from the cDNA nucleotide sequence. Toxicon, 29 (4-5). pp. 516-520. ISSN 1879-3150

1990

Chwetzoff, S. and Mollier, P. and Bouet, F. and Rowan, E.G. and Harvey, A.L. and Menez, A. (1990) On the purification of notexin: isolation of a single amino acid variant from the venom of Notechis scutatus scutatus. FEBS Letters, 261 (2). pp. 226-230. ISSN 0014-5793

Rowan, E.G. and Ducancel, F. and Doljansky, Y. and Harvey, A.L. and Boulain, J.C. and Menez, A. (1990) Nucleotide-sequence encoding a synergistic-like protein from the venom glands of Dendroaspis angusticeps. Nucleic Acids Research, 18 (6). p. 1639. ISSN 1362-4962

Takasaki, C. and Sugama, A. and Yanagita, A. and Tamiya, N. and Rowan, E.G. and Harvey, A.L. (1990) Effects of chemical modifications of Pa-11, a phospholipase A2 from the venom of Australian king brown snake (Pseudechis australis), on its biological activities. Toxicon, 28 (1). pp. 107-117. ISSN 1879-3150

1988

Norrie, Kenneth; Bruce, N and Mitchell, A and Priestley, K, eds. (1988) Genetic knowledge and the law. In: Truth and the Child. Family Care, Edinburgh, Edinburgh. ISBN 0950811750