Browse by Journal or other publication
2024
Mark, David R. and Tucker, Nicholas P. and Herron, Paul R. (2024) Chromosome architecture as a determinant for biosynthetic diversity in micromonospora. Microbial Genomics, 10 (11). 001313. ISSN 2057-5858
2023
Hobbs, Emma E. M. and Gloster, Tracey M. and Pritchard, Leighton (2023) cazy_webscraper : local compilation and interrogation of comprehensive CAZyme datasets. Microbial Genomics, 9 (8). 001086. ISSN 2057-5858
Lewis, Joseph M. and Mphasa, Madalitso and Banda, Rachel and Beale, Mathew A. and Mallewa, Jane and Anscome, Catherine and Zuza, Allan and Roberts, Adam P. and Heinz, Eva and Thomson, Nicholas R. and Feasey, Nicholas A. (2023) Genomic analysis of extended-spectrum beta-lactamase (ESBL) producing Escherichia coli colonising adults in Blantyre, Malawi reveals previously undescribed diversity. Microbial Genomics, 9 (6). 001035. ISSN 2057-5858
2022
Feeney, Morgan Anne and Newitt, Jake Terry and Addington, Emily and Algora-Gallardo, Lis and Allan, Craig and Balis, Lucas and Birke, Anna S. and Castaño-Espriu, Laia and Charkoudian, Louise K. and Devine, Rebecca and Gayrard, Damien and Hamilton, Jacob and Hennrich, Oliver and Hoskisson, Paul A. and Keith-Baker, Molly and Klein, Joshua G. and Kruasuwan, Worarat and Mark, David R. and Mast, Yvonne and McHugh, Rebecca E. and McLean, Thomas C. and Mohit, Elmira and Munnoch, John T. and Murray, Jordan and Noble, Katie and Otani, Hiroshi and Parra, Jonathan and Pereira, Camila F. and Perry, Louisa and Pintor-Escobar, Linamaria and Pritchard, Leighton and Prudence, Samuel M. M. and Russell, Alicia H. and Schniete, Jana K. and Seipke, Ryan F. and Sélem-Mojica, Nelly and Undabarrena, Agustina and Vind, Kristiina and van Wezel, Gilles P. and Wilkinson, Barrie and Worsley, Sarah F. and Duncan, Katherine R. and Fernández-Martínez, Lorena T. and Hutchings, Matthew I. (2022) ActinoBase : tools and protocols for researchers working on Streptomyces and other filamentous actinobacteria. Microbial Genomics, 8 (7). 000824. ISSN 2057-5858
Quek, Shannon and Cerdeira, Louise and Jeffries, Claire L. and Tomlinson, Sean and Walker, Thomas and Hughes, Grant L. and Heinz, Eva (2022) Wolbachia endosymbionts in two Anopheles species indicates independent acquisitions and lack of prophage elements. Microbial Genomics, 8 (4). 000805. ISSN 2057-5858
Edwards, Thomas and Heinz, Eva and van Aartsen, Jon and Howard, Alex and Roberts, Paul and Corless, Caroline and Fraser, Alice J. and Williams, Christopher T. and Bulgasim, Issra and Cuevas, Luis E. and Parry, Christopher M. and Roberts, Adam P. and Adams, Emily R. and Mason, Jenifer and Hubbard, Alasdair T.M. (2022) Piperacillin/tazobactam-resistant, cephalosporin-susceptible Escherichia coli bloodstream infections are driven by multiple acquisition of resistance across diverse sequence types. Microbial Genomics, 8 (4). 000789. ISSN 2057-5858
Lewis, Joseph M. and Mphasa, Madalitso and Banda, Rachel and Beale, Mathew A. and Mallewa, Jane and Heinz, Eva and Thomson, Nicholas R. and Feasey, Nicholas A. (2022) Genomic and antigenic diversity of colonizing Klebsiella pneumoniae isolates mirrors that of invasive isolates in Blantyre, Malawi. Microbial Genomics, 8 (3). 000778. ISSN 2057-5858
2021
Cornick, Jennifer and Musicha, Patrick and Peno, Chikondi and Seager, Ezgi and Tam, Pui Ying Iroh and Bilima, Sithembile and Bennett, Aisleen and Kennedy, Neil and Feasey, Nicholas and Heinz, Eva and Cain, Amy K. (2021) Genomic investigation of a suspected Klebsiella pneumoniae outbreak in a neonatal care unit in sub-Saharan Africa. Microbial Genomics, 7 (11). 000703. ISSN 2057-5858
Algora-Gallardo, Lis and Schniete, Jana K. and Mark, David R. and Hunter, Iain S. and Herron, Paul R. (2021) Bilateral symmetry of linear streptomycete chromosomes. Microbial Genomics, 7 (11). ISSN 2057-5858
Mäklin, Tommi and Kallonen, Teemu and Alanko, Jarno and Samuelsen, Ørjan and Hegstad, Kristin and Mäkinen, Veli and Corander, Jukka and Heinz, Eva and Honkela, Antti (2021) Bacterial genomic epidemiology with mixed samples. Microbial Genomics, 7 (11). 000691. ISSN 2057-5858
Gomez-Escribano, Juan Pablo and Algora Gallardo, Lis and Bozhüyük, Kenan A. J. and Kendrew, Steven G. and Huckle, Benjamin D. and Crowhurst, Nicola A. and Bibb, Mervyn J. and Collis, Andrew J. and Micklefield, Jason and Herron, Paul R. and Wilkinson, Barrie (2021) Genome editing reveals that pSCL4 is required for chromosome linearity in Streptomyces clavuligerus. Microbial Genomics, 7 (11). 000669. ISSN 2057-5858
Horesh, Gal and Taylor-Brown, Alyce and McGimpsey, Stephanie and Lassalle, Florent and Corander, Jukka and Heinz, Eva and Thomson, Nicholas R. (2021) Different evolutionary trends form the twilight zone of the bacterial pan-genome. Microbial Genomics, 7 (9). 000670. ISSN 2057-5858
Heinz, Eva and Holt, Kathryn E. and Meehan, Conor J. and Sheppard, Samuel K. (2021) Addressing parachute research and removing barriers for lmic researchers in microbial genomics. Microbial Genomics, 7 (10). 000722. ISSN 2057-5858
Moore, Matthew P. and Lamont, Iain L. and Williams, David and Paterson, Steve and Kukavica-Ibrulj, Irena and Tucker, Nicholas P. and Kenna, Dervla T.D. and Turton, Jane F. and Jeukens, Julie and Freschi, Luca and Wee, Brian A. and Loman, Nicholas J. and Holden, Stephen and Manzoor, Susan and Hawkey, Peter and Southern, Kevin W. and Walshaw, Martin J. and Levesque, Roger C. and Fothergill, Joanne L. and Winstanley, Craig (2021) Transmission, adaptation and geographical spread of the Pseudomonas aeruginosa Liverpool epidemic strain. Microbial Genomics, 7 (3). 000511. ISSN 2057-5858
Schniete, Jana K. and Selem-Mojica, Nelly and Birke, Anna S. and Cruz-Morales, Pablo and Hunter, Iain S. and Barona-Gómez, Francisco and Hoskisson, Paul A. (2021) ActDES – a curated actinobacterial database for evolutionary studies. Microbial Genomics, 7. 000498. ISSN 2057-5858
Horesh, Gal and Blackwell, Grace A. and Tonkin-Hill, Gerry and Corander, Jukka and Heinz, Eva and Thomson, Nicholas R. (2021) A comprehensive and high-quality collection of escherichia coli genomes and their genes. Microbial Genomics, 7 (2). 000499. ISSN 2057-5858
2019
Heinz, Eva and Brindle, Richard and Morgan-McCalla, Andrina and Peters, Keisha and Thomson, Nicholas R. (2019) Caribbean multi-centre study of Klebsiella pneumoniae : whole-genome sequencing, antimicrobial resistance and virulence factors. Microbial Genomics, 5 (5). pp. 1-12. ISSN 2057-5858
Wailan, Alexander M. and Coll, Francesc and Heinz, Eva and Tonkin-Hill, Gerry and Corander, Jukka and Feasey, Nicholas A. and Thomson, Nicholas R. (2019) rPinecone : define sub-lineages of a clonal expansion via a phylogenetic tree. Microbial Genomics, 5 (4). pp. 1-9. ISSN 2057-5858
2018
Heinz, Eva (2018) The return of Pfeiffer's bacillus : rising incidence of ampicillin resistance in haemophilus influenzae. Microbial Genomics, 4 (9). 000214. ISSN 2057-5858
2016
Follador, Rainer and Heinz, Eva and Wyres, Kelly L. and Ellington, Matthew J. and Kowarik, Michael and Holt, Kathryn E. and Thomson, Nicholas R. (2016) The diversity of Klebsiella pneumoniae surface polysaccharides. Microbial Genomics, 2 (8). e000073. ISSN 2057-5858