Items where subject is "Virology"

Article

Baister, Matthew and McTaggart, Ewan and McMenemy, Paul and Megiddo, Itamar and Kleczkowski, Adam (2024) COVID-19 in Scottish care homes : a metapopulation model of spread among residents and staff. Epidemics, 48. 100781. ISSN 1755-4365

Banks, Christopher J. and Colman, Ewan and Wood, Anthony J. and Doherty, Thomas and Kao, Rowland R. (2024) Modelling plausible scenarios for the Omicron SARS-CoV-2 variant from early-stage surveillance. Epidemics. 100800. ISSN 1755-4365

Barnard, Rosanna C. and Davies, Nicholas G. and Munday, James D. and Lowe, Rachel and Knight, Gwenan M. and Leclerc, Quentin J. and Tully, Damien C. and Hodgson, David and Pung, Rachael and Hellewell, Joel and Koltai, Mihaly and Simons, David and Abbas, Kaja and Kucharski, Adam J. and Procter, Simon R. and Sandmann, Frank G. and Pearson, Carl A.B. and Prem, Kiesha and Showering, Alicia and Meakin, Sophie R. and O’Reilly, Kathleen and McCarthy, Ciara V. and Quaife, Matthew and Wong, Kerry L.M. and Jafari, Yalda and Deol, Arminder K. and Houben, Rein M.G.J. and Diamond, Charlie and Jombart, Thibaut and Villabona-Arenas, C. Julian and Waites, William and Eggo, Rosalind M. and Endo, Akira and Gibbs, Hamish P. and Klepac, Petra and Williams, Jack and Quilty, Billy J. and Brady, Oliver and Emery, Jon C. and Atkins, Katherine E. and Chapman, Lloyd A.C. and Sherratt, Katharine and Abbott, Sam and Bosse, Nikos I. and Mee, Paul and Funk, Sebastian and Lei, Jiayao and Liu, Yang and Flasche, Stefan and Rudge, James W., Centre for Mathematical Modelling of Infectious Diseases COVID-19 working group (2022) Modelling the medium-term dynamics of SARS-CoV-2 transmission in England in the Omicron era. Nature Communications, 13 (1). 4879. ISSN 2041-1723

Bhatia, Ramya and Stewart, June and Moncur, Sharon and Cubie, Heather and Kavanagh, Kimberley and Pollock, Kevin G.J. and Busby-Earle, Camille and Williams, Alistair R.W. and Howie, Sarah and Cuschieri, Kate (2019) Development of an in-house ELISA to detect anti-HPV16-L1 antibodies in serum and dried blood spots. Journal of Virological Methods, 264. pp. 55-60. ISSN 1879-0984

Biddau, Marco and Kumar, T.R. Santha and Henrich, Philipp and Laine, Larissa M. and Blackburn, Gavin J. and Chokkathukalam, Achuthanunni and Li, Tao and Lee Sim, Kim and King, Lewis and Hoffman, Stephen L. and Barrett, Michael P. and Coombs, Graham H. and McFadden, Geoffrey I. and Fidock, David A. and Müller, Sylke and Sheiner, Lilach (2021) Plasmodium falciparum LipB mutants display altered redox and carbon metabolism in asexual stages and cannot complete sporogony in Anopheles mosquitoes. International Journal for Parasitology, 51 (6). pp. 441-453. ISSN 0020-7519

Bondarenko, Valeria and Mazzega, Pierre and Lajaunie, Claire (2021) Predictability of scrub typhus incidences time series in Thailand. Engineering Proceedings, 5 (1). 44. ISSN 2673-4591

Borg, Mitchell G. and Borg, Michael A. (2023) A trendline and predictive analysis of the first-wave COVID-19 infections in Malta. Epidemiologia, 4 (1). pp. 33-50. ISSN 2673-3986

Chidziwisano, Kondwani and Slekiene, Jurgita and Mosler, Hans-Joachim and Morse, Tracy (2020) Improving complementary food hygiene behaviors using the Risk, Attitude, Norms, Ability, and Self-Regulation approach in rural Malawi. American Journal of Tropical Medicine and Hygiene, 102 (5). pp. 1104-1115. ISSN 0002-9637

Choua, Melinda and Heath, Michael R. and Speirs, Douglas C. and Bonachela, Juan A. (2020) The effect of viral plasticity on the persistence of host-virus systems. Journal of Theoretical Biology, 498. 110263. ISSN 0022-5193

Colton, Hayley and Parker, Matthew D. and Stirrup, Oliver and Blackstone, James and Loose, Matthew and McClure, C Patrick and Roy, Sunando and Williams, Charlotte and McLeod, Julie and Smith, Darren and Taha, Yusri and Zhang, Peijun and Hsu, Sharon Nienyun and Kele, Beatrix and Harris, Kathryn and Mapp, Fiona and Williams, Rachel and Flowers, Paul and Breuer, Judith and Partridge, David G. and de Silva, Thushan I., COG-UK HOCI Investigators, The COVID-19 Genomics UK (COG-UK) Consortium (2023) Factors affecting turnaround time of SARS-CoV-2 sequencing for inpatient infection prevention and control decision making : analysis of data from the COG-UK HOCI study. The Journal of Hospital Infection, 131. pp. 34-42. ISSN 1532-2939

Connolly, James P. R. and Gabrielsen, Mads and Goldstone, Robert J. and Grinter, Rhys and Wang, Dai and Cogdell, Richard J. and Walker, Daniel and Smith, David G. E. and Roe, Andrew J. (2016) A highly conserved bacterial D-serine uptake system links host metabolism and virulence. PLOS Pathogens, 12 (1). e1005359. ISSN 1553-7366

Cuschieri, K. and Pan, J. and O Donnell, M. and Kirkwood, K. and Kavanagh, K. and Pollock, K.G. and Bhatia, R. and Graham, S.V. and Wakeham, K. (2021) Penile cancer and the HPV attributable fraction in Scotland; A retrospective cohort study. Journal of Clinical Virology, 134. 104717. ISSN 1386-6532

Elsheikha, Hany M. and Alkurashi, Mamdowh and Palfreman, Suzy and Castellanos, Marcos and Kong, Kenny and Ning, Evita and Elsaied, Nashwa A. and Geraki, Kalotina and Macnaughtan, William (2020) Impact of Neospora caninum infection on the bioenergetics and transcriptome of cerebrovascular endothelial cells. Pathogens, 9 (9). 710.

Estcourt, Claudia S and Howarth, Alison R and Copas, Andrew and Low, Nicola and Mapp, Fiona and Woode Owusu, Melvina and Flowers, Paul and Roberts, Tracy and Mercer, Catherine H and Wayal, Sonali and Symonds, Merle and Nandwani, Rak and Saunders, John and Johnson, Anne M and Pothoulaki, Maria and Althaus, Christian and Pickering, Karen and McKinnon, Tamsin and Brice, Susannah and Comer, Alex and Tostevin, Anna and Ogwulu, Chidubem Duby and Vojt, Gabriele and Cassell, Jackie A (2020) Accelerated partner therapy (APT) partner notification for people with Chlamydia trachomatis : protocol for the Limiting Undetected Sexually Transmitted infections to RedUce Morbidity (LUSTRUM) APT cross-over cluster randomised controlled trial. BMJ Open, 10. e034806. ISSN 2044-6055

Finch, Emilie and Lowe, Rachel and Fischinger, Stephanie and de St Aubin, Michael and Siddiqui, Sameed M. and Dayal, Diana and Loesche, Michael A. and Rhee, Justin and Beger, Samuel and Hu, Yiyuan and Gluck, Matthew J. and Mormann, Benjamin and Hasdianda, Mohammad A. and Musk, Elon R. and Alter, Galit and Menon, Anil S. and Nilles, Eric J. and Kucharski, Adam J. and Lei, Jiayao and Funk, Sebastian and Sun, Fiona Yueqian and Gimma, Amy and Nightingale, Emily S. and Medley, Graham and Abbott, Sam and Krauer, Fabienne and Davies, Nicholas G. and Jit, Mark and Endo, Akira and Brady, Oliver and Foss, Anna M. and Chan, Yung Wai Desmond and Jombart, Thibaut and van Zandvoort, Kevin and Eggo, Rosalind M. and Liu, Yang and Knight, Gwenan M. and Pearson, Carl A.B. and Abbas, Kaja and Atkins, Katherine E. and Clifford, Samuel and Koltai, Mihaly and Jafari, Yalda and Tully, Damien C. and Jarvis, Christopher I. and O'Reilly, Kathleen and Bosse, Nikos I. and Prem, Kiesha and Waites, William and Flasche, Stefan, the CMMID COVID-19 working group, the SpaceX COVID-19 Cohort Collaborative (2022) SARS-CoV-2 antibodies protect against reinfection for at least 6 months in a multicentre seroepidemiological workplace cohort. PLOS Biology, 20 (2). e3001531. ISSN 1544-9173

Francis, Robert J. and Robb, Gillian and McCann, Lee and Khatri, Bhagwati and Keeble, James and Dagg, Belinda and Amos, Brad and Salguero, Francisco J. and Ho, Mei Mei and Bullen, Anwen and McConnell, Gail and MacLellan-Gibson, Kirsty (2020) Three-dimensional in situ morphometrics of Mycobacterium tuberculosis infection within lesions by optical mesoscopy and novel acid-fast staining. Scientific Reports, 10. 21774. ISSN 2045-2322

Ghani, Azra C and Baguelin, Marc and Griffin, Jamie T and Flasche, Stefan and Pebody, Richard and Van Hoek, Albert Jan and Cauchemez, Simon and Hall, Ian M and Donnelly, Christl A and Robertson, Chris and White, Michael T and Barrass, Iain and Fraser, Christophe and Bermingham, Alison and Truscott, James and Ellis, Joanna and Jenkins, Helen E and Kafatos, George and Garske, Tini and Harris, Ross and McMenamin, Jim and Hawkins, Colin and Phin, Nick and Charlett, André and Zambon, Maria and Edmunds, W. John and Catchpole, Mike and Leach, Steve and White, Peter J and Ferguson, Neil M and Cooper, Ben S (2010) The early transmission dynamics of H1N1pdm influenza in the United Kingdom. PLoS Currents. ISSN 2157-3999

Hall-Swan, Sarah and Devaurs, Didier and Rigo, Mauricio M. and Antunes, Dinler A. and Kavraki, Lydia E. and Zanatta, Geancarlo (2021) DINC-COVID : a webserver for ensemble docking with flexible SARS-CoV-2 proteins. Computers in Biology and Medicine, 139. 104943. ISSN 1879-0534

Hoskisson, Paul A and Sumby, Paul and Smith, Margaret C. M. (2015) The phage growth limitation system in Streptomyces coelicolor A(3)2 is a toxin/antitoxin system, comprising enzymes with DNA methyltransferase, protein kinase and ATPase activity. Virology, 477. pp. 100-109. ISSN 1096-0341

Jeyaraman, Madhan and John, Albin and Koshy, Santhosh and Ranjan, Rajni and Anudeep, Talagavadi Channaiah and Jain, Rashmi and Swati, Kumari and Jha, Niraj Kumar and Sharma, Ankur and Kesari, Kavindra Kumar and Prakash, Anand and Nand, Parma and Jha, Saurabh Kumar and Reddy, P. Hemachandra (2021) Fostering mesenchymal stem cell therapy to halt cytokine storm in COVID-19. Biochimica et Biophysica Acta - Molecular Basis of Disease, 1867 (2). 166014. ISSN 1879-260X

Jha, Niraj Kumar and Jeyaraman, Madhan and Rachamalla, Mahesh and Ojha, Shreesh and Dua, Kamal and Chellappan, Dinesh Kumar and Muthu, Sathish and Sharma, Ankur and Jha, Saurabh Kumar and Jain, Rashmi and Jeyaraman, Naveen and GS, Prajwal and Satyam, Rohit and Khan, Fahad and Pandey, Pratibha and Verma, Nitin and Singh, Sandeep Kumar and Roychoudhury, Shubhadeep and Dolpuria, Sunny and Ruokolainen, Janne and Kesari, Kavindra Kumar (2021) Current understanding of novel coronavirus : molecular pathogenesis, diagnosis, and treatment approaches. Immuno, MDPI, 1 (1). pp. 30-66.

Joshi, Sameer and Chaudhari, Atul A. and Dennis, Vida and Kirby, Daniel J. and Perrie, Yvonne and Singh, Shree Ram (2018) Anti-RSV peptide-loaded liposomes for the inhibition of respiratory syncytial virus. Bioengineering, 5 (2). 37. ISSN 2306-5354

Kendrick, Andrew (2023) Caring for children with infectious diseases : children's experiences of fever hospitals and sanatoria in Scotland. Journal of the History of Childhood and Youth, 16 (1). pp. 9-27. ISSN 1941-3599

Kerr, Steven and Robertson, Chris and Nafilyan, Vahe and Lyons, Ronan A and Kee, Frank and Cardwell, Christopher R and Coupland, Carol and Lyons, Jane and Humberstone, Ben and Hippisley-Cox, Julia and Sheikh, Aziz (2022) Common protocol for validation of the QCOVID algorithm across the four UK nations. BMJ Open, 12 (6). e050994. ISSN 2044-6055

Knight, Gwenan M. and Pham, Thi Mui and Stimson, James and Funk, Sebastian and Jafari, Yalda and Pople, Diane and Evans, Stephanie and Yin, Mo and Brown, Colin S. and Bhattacharya, Alex and Hope, Russell and Semple, Malcolm G. and Abbott, Sam and Gimma, Amy and Gibbs, Hamish P. and Abbas, Kaja and Barnard, Rosanna C. and Sandmann, Frank G. and Bosse, Nikos I. and Mee, Paul and McCarthy, Ciara V. and Quaife, Matthew and Kucharski, Adam J. and Jarvis, Christopher I. and Hellewell, Joel and Finch, Emilie and Rosello, Alicia and Jit, Mark and Pung, Rachael and Eggo, Rosalind M. and Endo, Akira and Medley, Graham and Tully, Damien C. and Wong, Kerry L.M. and Liu, Yang and Sherratt, Katharine and Munday, James D. and Chapman, Lloyd A.C. and Hué, Stéphane and O’Reilly, Kathleen and Davies, Nicholas G. and Meakin, Sophie R. and Sun, Fiona Yueqian and Brady, Oliver and Villabona-Arenas, C. Julian and Atkins, Katherine E. and Prem, Kiesha and Hodgson, David and Koltai, Mihaly and Waites, William, ISARIC4C Investigators, CMMID COVID-19 Working Group (2022) The contribution of hospital-acquired infections to the COVID-19 epidemic in England in the first half of 2020. BMC Infectious Diseases, 22 (1). 556. ISSN 1471-2334

Kolek, Chester O. and Opanga, Sylvia A. and Okalebo, Faith and Birichi, Alfred and Kurdi, Amanj and Godman, Brian and Meyer, Johanna C. (2022) Impact of parental knowledge and beliefs on HPV vaccine hesitancy in Kenya—findings and implications. Vaccines, 10 (8). 1185. ISSN 2076-393X

Lamb, Karen Elaine and Flasche, Stefan and Diggle, Matthew and Inverarity, Donald and Greenhalgh, David and Jefferies, Johanna and Smith, Andrew and Edwards, Giles F S and Denham, Barbara and McMenamin, Jim and McDonald, Eisin and Mitchell, Tim J and Clarke, Stuart C and Robertson, Chris (2014) Trends in serotypes and sequence types among cases of invasive pneumococcal disease in Scotland, 1999-2010. Vaccine, 32 (34). pp. 4356-4363. ISSN 1873-2518

Lindsay, Laura and Calvert, Clara and Shi, Ting and Carruthers, Jade and Denny, Cheryl and Donaghy, Jack and Hopcroft, Lisa E. M. and Hopkins, Leanne and Goulding, Anna and McLaughlin, Terry and Moore, Emily and Taylor, Bob and Bhaskaran, Krishnan and Katikireddi, Srinivasa Vittal and McCabe, Ronan and McCowan, Colin and Simpson, Colin R. and Robertson, Chris and Sheikh, Aziz and Wood, Rachael and Stock, Sarah J. (2023) Neonatal and maternal outcomes following SARS-CoV-2 infection and COVID-19 vaccination : a population-based matched cohort study. Nature Communications, 14 (1). 5275. ISSN 2041-1723

Loh, M.M. and Yaxley, N. and Moore, G. and Holmes, D. and Todd, S. and Smith, A. and Macdonald, E. and Semple, S. and Cherrie, M. and Patel, M. and Hamill, R. and Leckie, A. and Dancer, S.J. and Cherrie, J.W. (2023) Measurement of SARS-CoV-2 in air and on surfaces in Scottish hospitals. Journal of Hospital Infection, 133. pp. 1-7. ISSN 1532-2939

Manoukian, S. and Stewart, S. and Graves, N. and Mason, H. and Robertson, C. and Kennedy, S. and Pan, J. and Kavanagh, K. and Haahr, L. and Adil, M. and Dancer, S.J. and Cook, B. and Reilly, J. (2021) Bed-days and costs associated with the inpatient burden of healthcare-associated infection in the UK. Journal of Hospital Infection, 114. pp. 43-50. ISSN 1532-2939

Marmara, V. and Cook, A. and Kleczkowski, A. (2014) Estimation of force of infection based on different epidemiological proxies : 2009/2010 Influenza epidemic in Malta. Epidemics, 9. pp. 52-61. ISSN 1755-4365

Masood, Sahabia and AlKubaisi, Noorah A. and Aslam, Maryam and Salman, Muhammad and Baraka, Mohamed A. and Ul Mustafa, Zia and Malhi, Tauqeer Hussain and Habib Khan, Yusra and Meyer, Johanna C. and Godman, Brian (2023) Knowledge of human monkeypox infection among final year medical, pharmacy and nursing students : a multicenter, cross-sectional analysis from Pakistan. Healthcare, 11 (20). 2777. ISSN 2227-9032

Mattey, M. and Spencer, J. (2008) Bacteriophage therapy - cooked goose or Phoenix rising? Current Opinion in Biotechnology, 19 (6). pp. 608-612. ISSN 0958-1669

McDonald, S.A. and Hutchinson, Sharon and Mills, P.R. and S.M., Bird and Cameron, S. and Dillon, J.F. and Goldberg, D.J. (2011) The influence of hepatitis C and alcohol on liver-related morbidity and mortality in Glasgow's injecting drug user population. Journal of Viral Hepatitis, 18 (4). e104-e133.

Meakin, Sophie and Abbott, Sam and Bosse, Nikos and Munday, James and Gruson, Hugo and Hellewell, Joel and Sherratt, Katharine and Chapman, Lloyd A.C. and Prem, Kiesha and Klepac, Petra and Jombart, Thibaut and Knight, Gwenan M. and Jafari, Yalda and Flasche, Stefan and Waites, William and Jit, Mark and Eggo, Rosalind M. and Villabona-Arenas, C. Julian and Russell, Timothy W. and Medley, Graham and Edmunds, W. John and Davies, Nicholas G. and Liu, Yang and Hué, Stéphane and Brady, Oliver and Pung, Rachael and Abbas, Kaja and Gimma, Amy and Mee, Paul and Endo, Akira and Clifford, Samuel and Sun, Fiona Yueqian and McCarthy, Ciara V. and Quilty, Billy J. and Rosello, Alicia and Sandmann, Frank G. and Barnard, Rosanna C. and Kucharski, Adam J. and Procter, Simon R. and Jarvis, Christopher I. and Gibbs, Hamish P. and Hodgson, David and Lowe, Rachel and Atkins, Katherine E. and Koltai, Mihaly and Pearson, Carl A.B. and Finch, Emilie and Wong, Kerry L.M. and Quaife, Matthew and O’Reilly, Kathleen, CMMID COVID-19 Working Group (2022) Comparative assessment of methods for short-term forecasts of COVID-19 hospital admissions in England at the local level. BMC Medicine, 20 (1). 86. ISSN 1741-7015

Mehanna, Hisham and Robinson, Max and Hartley, Andrew and Kong, Anthony and Foran, Bernadette and Fulton-Lieuw, Tessa and Dalby, Matthew and Mistry, Pankaj and Sen, Mehmet and O'Toole, Lorcan and Al Booz, Hoda and Dyker, Karen and Moleron, Rafael and Whitaker, Stephen and Brennan, Sinead and Cook, Audrey and Griffin, Matthew and Aynsley, Eleanor and Rolles, Martin and De Winton, Emma and Chan, Andrew and Srinivasan, Devraj and Nixon, Ioanna and Grumett, Joanne and Leemans, René and Buter, Jan and Henderson, Julia and Harrington, Kevin and McConkey, Christopher and Gray, Alastair and Dunn, Janet, De-ESCALaTE HPV Trial Group (2019) Radiotherapy plus cisplatin or cetuximab in low-risk human papillomavirus-positive oropharyngeal cancer (De-ESCALaTE HPV) : an open-label randomised controlled phase 3 trial. The Lancet, 393 (10166). pp. 51-60. ISSN 0140-6736

Mirza, Zainulabedeen R. M. H. and Hasan, Thaer and Seidel, Veronique and Yu, Jun (2018) Geraniol as a novel antivirulence agent against bacillary dysentery-causing Shigella sonnei. Virulence, 9 (1). pp. 450-455. ISSN 2150-5608

Mohapatra, Ranjan K. and Kandi, Venkataramana and Seidel, Veronique and Sarangi, Ashish K. and Mishra, Snehasish and Rabaan, Ali A. and Alhumaid, Saad and Mutair, Abbas Al and Dhama, Kuldeep (2022) Monkeypox lineages amid the ongoing COVID-19 pandemic : a global public health concern - correspondence. International Journal of Surgery, 107. 106968. ISSN 1743-9191

Mohapatra, Ranjan K. and Mishra, Snehasish and Seidel, Veronique and Sarangi, Ashish K. and Pintilie, Lucia and Kandi, Venkataramana (2022) Re-emerging zoonotic disease Leptospirosis in Tanzania amid the ongoing COVID-19 pandemic : needs attention - correspondence. International Journal of Surgery, 108. 106984. ISSN 1743-9191

Mohd Ngesom, Ahmad Mohiddin and Ahmad, Nazni Wasi and Han Lim, Lee and Md Lasim, Asmalia and Greenhalgh, David and Sahani, Mazrura and Hod, Rozita and Othman, Hidayatulfathi (2021) Evaluating the potential of pyriproxyfen dissemination using mosquito home system against Aedes albopictus at dengue hotspot area. Sains Malaysiana, 50 (8). ISSN 0126-6039

Montezano, Augusto C. and Camargo, Livia L. and Mary, Sheon and Neves, Karla B and Rios, Francisco J and Stein, Ross and Lopes, Rheure A. and Beattie, Wendy and Thomson, Jacqueline and Herder, Vanessa and Szemiel, Agnieszka M. and McFarlane, Steven and Palmarini, Massimo and Touyz, Rhian M. (2023) SARS-CoV-2 spike protein induces endothelial inflammation via ACE2 independently of viral replication. Scientific Reports, 13 (1). 14086. ISSN 2045-2322

Moore, Matthew P. and Lamont, Iain L. and Williams, David and Paterson, Steve and Kukavica-Ibrulj, Irena and Tucker, Nicholas P. and Kenna, Dervla T.D. and Turton, Jane F. and Jeukens, Julie and Freschi, Luca and Wee, Brian A. and Loman, Nicholas J. and Holden, Stephen and Manzoor, Susan and Hawkey, Peter and Southern, Kevin W. and Walshaw, Martin J. and Levesque, Roger C. and Fothergill, Joanne L. and Winstanley, Craig (2021) Transmission, adaptation and geographical spread of the Pseudomonas aeruginosa Liverpool epidemic strain. Microbial Genomics, 7 (3). 000511. ISSN 2057-5858

Morrison, Kirsty and Cullen, Lucy and James, Allan B. and Chua, Vera and Sullivan, Christopher and Robertson, Chris and Carruthers, Jade and Wood, Rachael and Jeffrey, Karen and MacDonald, Calum and Shah, Syed Ahmar and Rudan, Igor and Simpson, Colin R. and McCowan, Colin and Vittal Katikireddi, Srinivasa and Grange, Zoe and Ritchie, Lewis and Sheikh, Aziz (2023) Predictors of incomplete COVID-19 vaccine schedule among adults in Scotland : two retrospective cohort analyses of the primary schedule and third dose. Vaccine, 41 (40). pp. 5863-5876. ISSN 1873-2518

Mullen, L.A. and Cowden, J.M. and Cowden, D. and Wong, R.Y.P. (2002) An evaluation of the risk assessment method used by environmental health officers when inspecting food businesses. International Journal of Environmental Health Research, 12 (3). pp. 255-260. ISSN 0960-3123

Munday, James D. and Jarvis, Christopher I. and Gimma, Amy and Wong, Kerry L.M. and van Zandvoort, Kevin and Liu, Yang and Hellewell, Joel and Davies, Nicholas G. and Villabona-Arenas, C. Julian and Eggo, Rosalind M. and Endo, Akira and Bosse, Nikos I. and Gibbs, Hamish P. and Pearson, Carl A.B. and Sun, Fiona Yueqian and Jit, Mark and O’Reilly, Kathleen and Jafari, Yalda and Atkins, Katherine E. and Waterlow, Naomi R. and Rosello, Alicia and Chan, Yung Wai Desmond and Foss, Anna M. and Quilty, Billy J. and Russell, Timothy W. and Flasche, Stefan and Procter, Simon R. and Waites, William and Barnard, Rosanna C. and Kucharski, Adam J. and Jombart, Thibaut and Medley, Graham and Lowe, Rachel and Krauer, Fabienne and Tully, Damien C. and Prem, Kiesha and Lei, Jiayao and Brady, Oliver and Sandmann, Frank G. and Meakin, Sophie R. and Abbas, Kaja and Knight, Gwenan M. and Quaife, Matthew and Koltai, Mihaly and Abbott, Sam and Clifford, Samuel and Funk, Sebastian and Edmunds, W. John, CMMID COVID-19 Working Group (2021) Estimating the impact of reopening schools on the reproduction number of SARS-CoV-2 in England, using weekly contact survey data. BMC Medicine, 19 (1). 233. ISSN 1741-7015

Nguyen, Le Khanh Ngan and Howick, Susan and McLafferty, Dennis and Anderson, Gillian H. and Pravinkumar, Sahaya J. and Van Der Meer, Robert and Megiddo, Itamar (2022) Evaluating intervention strategies in controlling coronavirus disease 2019 (COVID-19) spread in care homes : an agent-based model - Corrigendum. Infection Control and Hospital Epidemiology, 43 (5). p. 685. ISSN 0899-823X

Nguyen, Le Khanh Ngan and Howick, Susan and McLafferty, Dennis and Anderson, Gillian Hopkins and Pravinkumar, Josephine and Van Der Meer, Robert and Megiddo, Itamar (2020) Evaluating intervention strategies in controlling COVID-19 spread in care homes : an agent-based model. Infection Control and Hospital Epidemiology. ISSN 0899-823X

Pebody, R and Warburton, F and Ellis, J and Andrews, N and Potts, A and Cottrel, S and Johnston, J and Reynolds, A and Gunson, R and Thompson, C and Galiano, M and Robertson, C and Byford, R and Gallagher, N and Sinnathamby, M and Yonova, I and Pathirannehelage, S and Donati, M and Moore, C and de Lusignan, S and McMenamin, J and Zambon, M (2016) Effectiveness of seasonal influenza vaccine for adults and children in preventing laboratory-confirmed influenza in primary care in the United Kingdom : 2015/16 end-of-season results. Eurosurveillance, 21 (38). pp. 1-11. ISSN 1560-7917

Pebody, Richard and Djennad, Abdelmajid and Ellis, Joanna and Andrews, Nick and Marques, Diogo F P and Cottrell, Simon and Reynolds, Arlene J and Gunson, Rory and Galiano, Monica and Hoschler, Katja and Lackenby, Angie and Robertson, Chris and O'Doherty, Mark and Sinnathamby, Mary and Panagiotopoulos, Nikolaos and Yonova, Ivelina and Webb, Rebecca and Moore, Catherine and Donati, Matthew and Sartaj, Muhammad and Shepherd, Samantha J and McMenamin, Jim and de Lusignan, Simon and Zambon, Maria (2019) End of season influenza vaccine effectiveness in adults and children in the United Kingdom in 2017/18. Eurosurveillance, 24 (31). 1800488. ISSN 1025-496X

Pfarr, Kenneth M. and Krome, Anna K. and Al-Obaidi, Issraa and Batchelor, Hannah and Vaillant, Michel and Hoerauf, Achim and Opoku, Nicholas O. and Kuesel, Annette C. (2023) The pipeline for drugs for control and elimination of neglected tropical diseases : 2. Oral anti-infective drugs and drug combinations for off-label use. Parasites and Vectors, 16 (1). 394. ISSN 1756-3305

Procter, Simon R. and Abbas, Kaja and Flasche, Stefan and Griffiths, Ulla and Hagedorn, Brittany and O’Reilly, Kathleen M. and Waites, William, CMMID COVID-19 Working Group (2021) SARS-CoV-2 infection risk during delivery of childhood vaccination campaigns : a modelling study. BMC Medicine, 19. 198. ISSN 1741-7015

Pung, Rachael and Firth, Josh A. and Spurgin, Lewis G. and Chang, Annie and Kong, Jade and Wong, Jazzy and Jin, Ooi Jo and Selvaraj, Deepa and Yong, Dominique and Lang, Jocelyn and Sivalingam, Abilash and Procter, Simon R. and Flasche, Stefan and Waites, William and Prem, Kiesha and Pearson, Carl A.B. and Gibbs, Hamish P. and Sherratt, Katharine and Villabona-Arenas, C. Julian and Wong, Kerry L.M. and Liu, Yang and Mee, Paul and Chapman, Lloyd A.C. and Atkins, Katherine E. and Quaife, Matthew and Munday, James D. and Funk, Sebastian and Eggo, Rosalind M. and Huè, Stèphane and Davies, Nicholas G. and Hodgson, David and Abbas, Kaja and McCarthy, Ciara V. and Hellewell, Joel and Abbott, Sam and Bosse, Nikos I. and Brady, Oliver and Barnard, Rosanna C. and Jit, Mark and Tully, Damien C. and Medley, Graham and Sun, Fiona Yueqian and Jarvis, Christopher I. and Lowev, Rachel and O’Reilly, Kathleen and Meakin, Sophie R. and Endo, Akira and Sandmann, Frank G. and Edmunds, W. John and Koltai, Mihaly, Singapore CruiseSafe working group, CMMID COVID-19 Working Group (2022) Using high-resolution contact networks to evaluate SARS-CoV-2 transmission and control in large-scale multi-day events. Nature Communications, 13 (1). 1956. ISSN 2041-1723

Quaife, M. and Medley, GF and Jit, M. and Drake, T. and Asaria, M. and van Baal, P. and Baltussen, R. and Bollinger, L. and Bozzani, F. and Brady, O. and Broekhuizen, H. and Chalkidou, K. and Chi, Y.-L. and Dowdy, DW and Griffin, S. and Haghparast-Bidgoli, H. and Hallett, T. and Hauck, K. and Hollingsworth, TD and McQuaid, CF and Menzies, NA and Merritt, MW and Mirelman, A. and Morton, A. and Ruiz, FJ and Siapka, M. and Skordis, J. and Tediosi, F. and Walker, P. and White, RG and Winskill, P. and Vassall, A. and Gomez, GB (2022) Considering equity in priority setting using transmission models : recommendations and data needs. Epidemics, 41. 100648. ISSN 1755-4365

Quek, Shannon and Hadermann, Amber and Wu, Yang and De Coninck, Lander and Hegde, Shrilakshmi and Boucher, Jordan R and Cresswell, Jessica and Foreman, Ella and Steven, Andrew and LaCourse, E James and Ward, Stephen A and Wanji, Samuel and Hughes, Grant L and Patterson, Edward I and Wagstaff, Simon C and Turner, Joseph D and Parry, Rhys H and Kohl, Alain and Heinz, Eva and Otabil, Kenneth Bentum and Matthijnssens, Jelle and Colebunders, Robert and Taylor, Mark J (2024) Diverse RNA viruses of parasitic nematodes can elicit antibody responses in vertebrate hosts. Nature microbiology, 9 (10). pp. 2488-2505. ISSN 2058-5276

Robertson, Chris and Kerr, Steven and Sheikh, Aziz (2023) Severity of Omicron BA.5 variant and protective effect of vaccination : national cohort and matched analyses in Scotland. The Lancet Regional Health - Europe, 28. 100638.

Sangal, Vartul and Jones, Amanda L. and Goodfellow, Michael and Hoskisson, Paul A. and Kämpfer, Peter and Sutcliffe, Iain C. (2015) Genomic analyses confirm close relatedness between Rhodococcus defluvii and Rhodococcus equi (Rhodococcus hoagii). Archives of Microbiology, 197 (1). pp. 113-116. ISSN 1432-072X

Sefah, Israel Abebrese and Chetty, Sarentha and Yamoah, Peter and Meyer, Johanna C. and Chigome, Audrey and Godman, Brian and Bangalee, Varsha (2023) A multicenter cross-sectional survey of knowledge, attitude and practices of healthcare professionals towards antimicrobial stewardship in Ghana : findings and implications. Antibiotics, 12 (10). 1497. ISSN 2079-6382

Sfikas, Nikolaos and Greenhalgh, David and Huo, Wenwen and Mortimer, Janet and Robertson, Chris (2014) Quantifying unrecognised replication present in reports of HIV diagnoses. Statistics in Medicine, 33 (16). pp. 2774-2796. ISSN 0277-6715

Shah, Syed Ahmar and Robertson, Chris and Rudan, Igor and Murray, Josephine Lk and McCowan, Colin and Grange, Zoe and Buelo, Audrey and Sullivan, Christopher and Simpson, Colin R and Ritchie, Lewis D and Sheikh, Aziz (2022) BNT162b2 and ChAdOx1 nCoV-19 vaccinations, incidence of SARS-CoV-2 infections and COVID-19 hospitalisations in Scotland in the Delta era. Journal of Global Health, 12. 05008. ISSN 2047-2978

Shi, Ting and Robertson, Chris and Sheikh, Aziz (2023) Effectiveness and safety of coronavirus disease 2019 vaccines. Current opinion in pulmonary medicine, 29 (3). pp. 138-142. ISSN 1531-6971

Smith, M. and Gettinby, G. and Granstrom, M. and Gray, J.S. and Guy, E.C. and Revie, C.W. and Robertson, J.N. and Stanek, G. (1998) The European Union concerted action world wide web site for Lyme Borreliosis. Zentralblatt fur Bakteriologie, 287 (3). pp. 266-270. ISSN 0934-8840

Stevenson, Andrew and Kavanagh, Kim and Pan, Jiafeng and Stevenson, Lynne and Griffin, Heather and Doorbar, John and Scott, Evelyn and Deeny, Miriam and Cuschieri, Kate and Graham, Sheila V. (2018) Risk stratification of cervical disease using detection of human papillomavirus (HPV) E4 protein and cellular MCM protein in clinical liquid based cytology samples. Journal of Clinical Virology, 108. pp. 19-25. ISSN 1386-6532

Stirrup, Oliver and Blackstone, James and Mapp, Fiona and MacNeil, Alyson and Panca, Monica and Holmes, Alison and Machin, Nicholas and Shin, Gee Yen and Mahungu, Tabitha and Saeed, Kordo and Saluja, Tranprit and Taha, Yusri and Mahida, Nikunj and Pope, Cassie and Chawla, Anu and Cutino-Moguel, Maria-Teresa and Tamuri, Asif and Williams, Rachel and Darby, Alistair and Robertson, David L and Flaviani, Flavia and Nastouli, Eleni and Robson, Samuel and Smith, Darren and Laing, Kenneth and Monahan, Irene and Kele, Beatrix and Haldenby, Sam and George, Ryan and Bashton, Matthew and Witney, Adam A and Byott, Matthew and Coll, Francesc and Chapman, Michael and Peacock, Sharon J and Hughes, Joseph and Nebbia, Gaia and Partridge, David G and Parker, Matthew and Price, James Richard and Peters, Christine and Roy, Sunando and Snell, Luke B and de Silva, Thushan I and Thomson, Emma and Flowers, Paul and Copas, Andrew and Breuer, Judith (2022) Effectiveness of rapid SARS-CoV-2 genome sequencing in supporting infection control for hospital-onset COVID-19 infection : multicenter, prospective study. eLife, 11. e78427. ISSN 2050-084X

Taylor, Rachel A. and Berriman, Alexander DC and Gale, Paul and Kelly, Louise A. and Snary, Emma L. (2019) A generic framework for spatial quantitative risk assessments of infectious diseases : lumpy skin disease case study. Transboundary and Emerging Diseases, 66 (1). pp. 131-143. ISSN 1865-1674

Tibble, Holly and Proud, Euan and Mueller, Tanja and Hall, Elliott and Kurdi, Amanj and Robertson, Chris and Bennie, Marion and Woolford, Lana and Laidlaw, Lynn and Sterniczuk, Kamil and Sheikh, Aziz (2024) Real-world severe COVID-19 outcomes associated with use of antivirals and neutralising monoclonal antibodies in Scotland. npj Primary Care Respiratory Medicine, 34. 17. ISSN 2055-1010

Tomb, Rachael M. and Maclean, Michelle and Coia, John E. and Graham, Elizabeth and McDonald, Michael and Atreya, Chintamani D. and MacGregor, Scott J. and Anderson, John G. (2017) New proof-of-concept in viral inactivation : virucidal efficacy of 405 nm light against feline calicivirus as a model for norovirus decontamination. Food and Environmental Virology, 9 (2). pp. 159-167. ISSN 1867-0342

Tsang, Ruby SM and Joy, Mark and Byford, Rachel and Robertson, Chris and Anand, Sneha N and Hinton, William and Mayor, Nikhil and Kar, Debasish and Williams, John and Victor, William and Akbari, Ashley and Bradley, Declan T and Murphy, Siobhan and O’Reilly, Dermot and Owen, Rhiannon K and Chuter, Antony and Beggs, Jillian and Howsam, Gary and Sheikh, Aziz and Hobbs, FD Richard and de Lusignan, Simon (2023) Adverse events following first and second dose COVID-19 vaccination in England, October 2020 to September 2021 : a national vaccine surveillance platform self-controlled case series study. Eurosurveillance, 28 (3). ISSN 1560-7917

Ul Mustafa, Zia and Batool, Arfa and Ibrar, Hadia and Salman, Muhammad and Habib Khan, Yusra and Malhi, Tauqeer Hussain and Meyer, Johanna C. and Godman, Brian and Moore, Catrin E. (2024) Bacterial co-infections, secondary infections and antimicrobial use among hospitalized COVID-19 patients in the sixth wave in Pakistan : findings and implications. Expert Review of Anti-infective Therapy, 22 (4). pp. 229-240. ISSN 1744-8336

Ul Mustafa, Zia and Khan, Amer Hayat and Salman, Muhammad and Harun, Sabariah Noor and Meyer, Johanna C. and Godman, Brian and Seaton, R. Andrew (2023) Health care-associated infections among neonates and children in Pakistan : findings and the implications from a point prevalence survey. Journal of Hospital Infection, 141. pp. 142-151. ISSN 1532-2939

Vasileiou, Eleftheria and Sheikh, Aziz and Butler, Chris C and Robertson, Chris and Kavanagh, Kimberley and Englishby, Tanya and Lone, Nazir I and von Wissmann, Beatrix and McMenamin, Jim and Ritchie, Lewis D and Schwarze, Jürgen and Gunson, Rory and Simpson, Colin R (2019) Seasonal influenza vaccine effectiveness in people with asthma : a national test-negative design case-control study. Clinical Infectious Diseases. ISSN 1058-4838

Waites, W. and Cavaliere, M. and Danos, V. and Datta, R. and Eggo, R. M. and Hallett, T. B. and Manheim, D. and Panovska-Griffiths, J. and Russell, T. W. and Zarnitsyna, V. I. (2022) Compositional modelling of immune response and virus transmission dynamics. Philosophical Transactions A: Mathematical, Physical and Engineering Sciences, 380 (2233). pp. 1-24. 20210307. ISSN 1471-2962

Ward, Chris and Pedraza, Johanna and Kavanagh, Kimberley and Johannessen, Ingolfur and Cuschieri, Kate (2014) An evaluation of Qiagen HPV sign for the detection and genotyping of cervical lesions and oropharyngeal squamous cell carcinomas. Journal of Virological Methods, 207. pp. 128-132. ISSN 1879-0984

Webster, Claire L. and Waldron, Fergal M. and Robertson, Shaun and Crowson, Daisy and Ferrari, Giada and Quintana, Juan F. and Brouqui, Jean-Michel and Bayne, Elizabeth H. and Longdon, Ben and Buck, Amy H. and Lazzaro, Brian P. and Akorli, Jewelna and Haddrill, Penelope R. and Obbard, Darren J. (2015) The discovery, distribution, and evolution of viruses associated with Drosophila melanogaster. PLOS Biology, 13 (7). pp. 1-33. ISSN 1544-9173

Williamson, Gordon and Brito, Ana Sofia and Bizior, Adriana and Tamburrino, Giulia and Dias Mirandela, Gaetan and Harris, Thomas and Hoskisson, Paul A. and Zachariae, Ulrich and Marini, Anna Maria and Boeckstaens, Melanie and Javelle, Arnaud (2022) Coexistence of ammonium transporter and channel mechanisms in Amt-Mep-Rh Twin-His variants impairs the filamentation signalling capacity of fungal Mep2 transceptors. mBio, 13 (2). e02913-21. ISSN 2150-7511

Xu, Dan and Wang, Depu and Yang, Xiaofeng and Cao, Meng and Yu, Jun and Yili, Wang (2014) Fusion of HPV L1 into Shigella surface IcsA : a new approach in developing live attenuated Shigella-HPV vaccine. Antiviral Research, 102. pp. 61-69. ISSN 1872-9096

Xu, Dan and Yang, Xiaofeng and Wang, Depu and Yu, Jun and Yili, Wang (2014) Surface display of the HPV L1 capsid protein by the autotransporter Shigella IcsA. Journal of Microbiology, 52 (1). pp. 77-82. ISSN 1976-3794

Zhai, Xuanpei and Li, Wenshuang and Wei, Fengying and Mao, Xuerong (2023) Dynamics of an HIV/AIDS transmission model with protection awareness and fluctuations. Chaos, Solitons and Fractals, 169. 113224. ISSN 0960-0779

Conference or Workshop Item

Kibuule, Dan and Nambahu, Lahya and Sefah, Israel Abebrese and Kurdi, Amanj and Phuong, Thuy Nguyen Thi and Kwon, Hye-Young and Godman, Brian (2020) Activities in Namibia to limit the impact of COVID-19 versus Europe and Iran and the implications for the future. In: Federation of Infection Societies/Healthcare Infection Society International, 2020-11-09 - 2020-11-11, Online. (In Press)

Omerigwe, S.A. and Oluwasegun, J.A. and Aro, E.O. and Ockiya, M.A. and Jimoh, A.O. and Olaoye, O.J. and Ajasa, O.S. and Nwaigwe, C.U. and Adedokun, P.T. and Adediran, D.A. and Oladipo, E.K. (2024) Bioinformatic analysis of conformational epitope peptide sequences for the effective diagnosis of Sudan Ebola Virus disease. In: BioMedEng24, 2024-09-05 - 2024-09-06, Queen Mary University of London.

Tomb, Rachael and MacLean, Michelle and Coia, John and MacGregor, Scott and Graham, Libby and MacDonald, Mike and Anderson, John (2014) Efficacy of 405nm light for inactivation of feline calicivirus : a surrogate for norovirus. In: The 9th Healthcare Infection Society International Conference 2014, 2014-11-16 - 2014-11-18, Lyon Convention Centre.

Report

Morrison, Ciarán (2019) Digital Health and Care Institutes : Scottish Diabetes Policy and Market Report. University of Strathclyde, Glasgow.

Rimpiläinen, Sanna and Thomas, Jennifer and Morrison, Ciarán (2020) Global Examples of COVID-19 Surveillance Technologies : Flash Report. University of Strathclyde, Glasgow.

Monograph

Waites, William and Cavaliere, Matteo and Danos, Vincent and Datta, Ruchira and Eggo, Rosalind M. and Hallett, Timothy B. and Manheim, David and Panovska-Griffiths, Jasmina and Russell, Timothy W. and Zarnitsyna, Veronika I. (2021) Compositional modelling of immune response and virus transmission dynamics. Other. arXiv.org, Ithaca, N.Y..