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McAlinden, Niall and Reiche, Christopher F and Clark, Andrew M and Scharf, Robert and Cheng, Yunzhou and Sharma, Rohit and Rieth, Loren and Dawson, Martin D and Angelucci, Alessandra and Mathieson, Keith and Blair, Steve (2024) In vivo optogenetics using a Utah Optrode Array with enhanced light output and spatial selectivity. Journal of Neural Engineering, 21 (4). 046051. ISSN 1741-2552

Clark, Andrew M. and Ingold, Alexander and Reiche, Christopher F. and Cundy III, Donald and Balsor, Justin L. and Federer, Frederick and McAlinden, Niall and Cheng, Yunzhou and Rolston, John D. and Rieth, Loren and Dawson, Martin D. and Mathieson, Keith and Blair, Steve and Angelucci, Alessandra (2024) An optrode array for spatiotemporally-precise large-scale optogenetic stimulation of deep cortical layers in non-human primates. Communications Biology, 7. 329. ISSN 2399-3642

Clark, Andrew M. and Ingold, Alexander and Reiche, Christopher F. and Cundy III, Donald and Balsor, Justin L. and Federer, Frederick and McAlinden, Niall and Cheng, Yunzhou and Rolston, John D. and Rieth, Loren and Dawson, Martin D. and Mathieson, Keith and Blair, Steve and Angelucci, Alessandra (2023) An optrode array for spatiotemporally precise large-scale optogenetic stimulation of deep cortical layers in non-human primates. Other. bioRxiv, Cold Spring Harbor, NY.

Patel, Amisha A. and McAlinden, Niall and Mathieson, Keith and Sakata, Shuzo (2020) Simultaneous electrophysiology and fiber photometry in freely behaving mice. Frontiers in Neuroscience, 14. 148. ISSN 1662-453X

McAlinden, Niall and Cheng, Yunzhou and Scharf, Robert and Xie, Enyuan and Gu, Erdan and Reiche, Christopher F. and Sharma, Rohit and Tathireddy, Prashant and Dawson, Martin D. and Rieth, Loren and Blair, Steve and Mathieson, Keith (2019) Multisite microLED optrode array for neural interfacing. Neurophotonics, 6 (3). 035010.

Scharf, Robert and Reiche, Christopher F. and McAlinden, Niall and Cheng, Yunzhou and Xie, Enyuan and Sharma, Rohit and Tathireddy, Prashant and Rieth, Loren and Mathieson, Keith and Blair, Steve; (2018) A compact integrated device for spatially selective optogenetic neural stimulation based on the Utah Optrode Array. In: Optogenetics and Optical Manipulation 2018. SPIE, USA. ISBN 9781510614499

Glass, David G. and McAlinden, Niall and Millington, Owain R. and Wright, Amanda J. (2017) A minimally invasive optical trapping system to understand cellular interactions at onset of an immune response. PLoS ONE, 12 (12). e0188581. ISSN 1932-6203

Pisano, Filippo and Zampaglione, Erin and McAlinden, Niall and Roebber, Jennifer and Dawson, Martin D. and Mathieson, Keith and Sher, Alexander (2017) Large scale matching of function to the genetic identity of retinal ganglion cells. Scientific Reports, 7 (1). 15395. ISSN 2045-2322

McKendry, Jonathan and Xie, Enyuan and Herrnsdorf, Johannes and McAlinden, Niall and Gu, Erdan and Watson, Ian and Strain, Michael and Mathieson, Keith and Dawson, Martin (2017) Structured illumination for communications and bioscience using GaN micro-LED arrays interfaced to CMOS. In: Emerging Technologies in Communications, Microsystems, Optoelectronics and Sensors, 2017-05-28 - 2017-05-30, Sofitel Victoria Warszaw.

Scharf, Robert and Tsunematsu, Tomomi and McAlinden, Niall and Dawson, Martin D. and Sakata, Shuzo and Mathieson, Keith (2016) Depth-specific optogenetic control in vivo with a scalable, high density µLED neural probe. Scientific Reports, 6. 28381. ISSN 2045-2322

McAlinden, Niall and Gu, Erdan and Dawson, Martin D and Sakata, Shuzo and Mathieson, Keith (2015) Optogenetic activation of neocortical neurons in vivo with a sapphire-based micro-scale LED probe. Frontiers in Neural Circuits, 9. 25. ISSN 1662-5110

Persechini, Lina and Verre, R. and McAlinden, Niall and Wang, Jing-Jing and Ranjan, M. and Facsko, S and Shvets, I. V. and McGilp, John (2014) An analytic approach to modeling the optical response of anisotropic nanoparticle arrays at surfaces and interfaces. Journal of Physics: Condensed Matter, 26 (14). 145302. ISSN 0953-8984

McAlinden, Niall and Glass, David Gavin and Millington, Owain and Wright, Amanda (2014) Accurate position tracking of optically trapped live cells. Biomedical Optics Express, 5 (4). pp. 1026-1037. ISSN 2156-7085

Hogan, Conor and Ferraro, Elena and McAlinden, Niall and McGilp, John (2013) Optical fingerprints of Si honeycomb chains and atomic gold wires on the Si (111)-(5× 2)-Au surface. Physical Review Letters, 111 (8). 087401. ISSN 1079-7114

Müllenbroich, Caroline and McAlinden, Niall and Wright, Amanda (2013) Adaptive optics in an optical trapping system for enhanced lateral trap stiffness at depth. Journal of Optics, 15 (7). 075305. ISSN 0972-8821

McAlinden, Niall and Massoubre, David and Richardson, Elliot and Gu, Erdan and Sakata, Shuzo and Dawson, Martin D and Mathieson, Keith (2013) Thermal and optical characterization of micro-LED probes for in vivo optogenetic neural stimulation. Optics Letters, 38 (6). pp. 992-994.

McAlinden, Niall and Glass, David Gavin and Millington, Owain and Wright, Amanda; Dholakia, Kishan and Spalding, Gabriel C., eds. (2013) Designing an experiment to measure cellular interaction forces. In: SPIE Proceedings. SPIE, GBR, 88101L.

Hogan, Conor and McAlinden, Niall and McGilp, John F. (2012) Optical characterization of gold chains and steps on the vicinal Si(557) surface : theory and experiment. Physica Status Solidi B, 249 (6). pp. 1095-1104. ISSN 0370-1972

McAlinden, Niall and Wang, Jing-Jing and McGilp, John (2012) Anisotropic optical response of elongated Pb islands in the infrared spectral region. Physica Status Solidi B. ISSN 0370-1972

Muellenbroich, Caroline and McAlinden, Niall and Wright, Amanda (2011) Aberration correction in an optical trapping system using a deformable membrane mirror. In: Frontiers in Optics 2011/Laser Science XXVII, 2011-10-16 - 2011-10-20.

Verre, R. and Fleischer, K. and Smith, C. and McAlinden, N. and McGilp, J. F. and Shvets, I. V. (2011) Probing the out-of-plane optical response of plasmonic nanostructures using spectroscopic ellipsometry. Physical Review B, 84 (8). -. 085440. ISSN 1098-0121

Verre, R. and Fleischer, K. and Sofin, R. G. S. and McAlinden, N. and McGilp, J. F. and Shvets, I. V. (2011) In situ characterization of one-dimensional plasmonic Ag nanocluster arrays. Physical Review B, 83 (12). -. 125432. ISSN 1098-0121

McAlinden, Niall and McGilp, John (2011) Optical Properties of Capped Metallic Nanostructures, Grown on Silicon. PhD thesis, Trinity College Dublin.

McAlinden, Niall and Glass, David Gavin and Millington, Owain and Wright, Amanda; (2011) Viability studies of optically trapped T-cells. In: Optical Trapping and Optical Micromanipulation VIII. SPIE, USA.

Watts, Fiona and Tan, Lay Ean and Tassieri, Manlio and McAlinden, Niall and Wilson, Clive and Girkin, John and Wright, Amanda (2011) The viscoelastic properties of the vitreous humor measured using an optically trapped local probe. In: SPIE Optics and Photonics, 2011-08-21 - 2011-08-25.

McAlinden, N. and McGilp, J. F. (2010) New evidence for the influence of step morphology on the formation of Au atomic chains on vicinal Si(111) surfaces. EPL: A Letters Journal Exploring the Frontiers of Physics, 92 (6). -. 67008. ISSN 0295-5075

McAlinden, N and McGilp, J F (2009) Using surface and interface optics to probe the capping, with amorphous Si, of Au atom chains grown on vicinal Si(111). Journal of Physics: Condensed Matter, 21 (47). 474208.

Jacob, Julie and McAlinden, Niall and Fleischer, K. and Chandola, S and McGilp, J F (2008) Reflectance anisotropy studies of 5x2-Au structures grown on Si(111) surfaces with different step formations. In: 7th International Conference on Optics of Surfaces and Interfaces, 2007-07-15 - 2007-07-20.