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Mathematics & Statistics hosts the Marine Population Modelling group which is engaged in research into topics surrounding marine resource modelling and ecology. Recent work has included important developments in the population modelling of marine species.

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Number of items: 32.

Article

Šarić, Ela and Quinn, Gerry A. and Nalpas, Nicolas and Paradžik, Tina and Kazazić, Saša and Filić, Želimira and Šemanjski, Maja and Herron, Paul and Hunter, Iain and Maček, Boris and Vujaklija, Dušica (2022) Phosphoproteome dynamics of streptomyces rimosus during submerged growth and antibiotic production. mSystems, 7 (5). ISSN 2379-5077

Algora-Gallardo, Lis and Schniete, Jana K. and Mark, David R. and Hunter, Iain S. and Herron, Paul R. (2021) Bilateral symmetry of linear streptomycete chromosomes. Microbial Genomics, 7 (11). ISSN 2057-5858

Gomez-Escribano, Juan Pablo and Algora Gallardo, Lis and Bozhüyük, Kenan A. J. and Kendrew, Steven G. and Huckle, Benjamin D. and Crowhurst, Nicola A. and Bibb, Mervyn J. and Collis, Andrew J. and Micklefield, Jason and Herron, Paul R. and Wilkinson, Barrie (2021) Genome editing reveals that pSCL4 is required for chromosome linearity in Streptomyces clavuligerus. Microbial Genomics, 7 (11). 000669. ISSN 2057-5858

Zin, Noraziah M. and Ismail, Aisha and Mark, David R. and Westrop, Gareth and Schniete, Jana K. and Herron, Paul (2021) Adaptation to endophytic lifestyle through genome reduction by Kitasatospora sp. SUK42. Frontiers in Bioengineering and Biotechnology, 9. 740722. ISSN 2296-4185

Schniete, Jana K. and Reumerman, Richard and Kerr, Leena and Tucker, Nicholas P. and Hunter, Iain S. and Herron, Paul R. and Hoskisson, Paul A. (2020) Differential transcription of expanded gene families in central carbon metabolism of Streptomyces coelicolor A3(2). Access Microbiology. ISSN 2516-8290

Cortés-Albayay, Carlos and Dorador, Cristina and Schumann, Peter and Schniete, Jana K. and Herron, Paul and Andrews, Barbara and Asenjo, Juan and Nouioui, Imen (2019) Streptomyces altiplanensis sp. nov., an alkalitolerant species isolated from Chilean Altiplano soil, and emended description of streptomyces chryseus (Krasil'nikov et al. 1965) Pridham 1970. International Journal of Systematic and Evolutionary Microbiology, 69 (8). pp. 2498-2505.

Alamer, Saleh and Eissa, Shimaa and Chinnappan, Raja and Herron, Paul and Zourob, Mohammed (2018) Rapid colorimetric lactoferrin-based sandwich immunoassay on cotton swabs for the detection of foodborne pathogenic bacteria. Talanta, 185. pp. 275-280. ISSN 0039-9140

Schniete, Jana K. and Salih, Talal S. and Algora-Gallardo, Lis and Santos, Tiago and Filgueira-Martinez, Sara and Herron, Paul R. (2017) Draft genome sequence of Streptomyces phaeoluteigriseus DSM41896. Genome Announcements, 5 (21). e00371-17. ISSN 2169-8287

Kois-Ostrowska, Agnieszka and Strzałka, Agnieszka and Lipietta, Natalia and Tilley, Emma and Zakrzewska-Czerwińska, Jolanta and Herron, Paul and Jakimowicz, Dagmara (2016) Unique function of the bacterial chromosome segregation machinery in apically growing streptomyces - targeting the chromosome to new hyphal tubes and its anchorage at the tips. PLOS Genetics, 12 (12). e1006488. ISSN 1553-7390

Sandoval-Calderón, Mario and Nguyen, Don D. and Kapono, Clifford A. and Herron, Paul and Dorrestein, Pieter C. and Sohlenkamp, Christian (2015) Plasticity of streptomyces coelicolor membrane composition under different growth conditions and during development. Frontiers in Microbiology, 6. 1465. ISSN 1664-302X

Baba, Mohd Shukri and Zin, Noraziah Mohamad and Hassan, Zainal Abidin Abu and Latip, Jalifah and Pethick, Florence and Hunter, Iain S. and Edrada-Ebel, RuAngelie and Herron, Paul R. (2015) In vivo antimalarial activity of the endophytic actinobacteria, Streptomyces SUK 10. Journal of Microbiology, 53 (12). pp. 847-855. ISSN 1976-3794

Lešnik, Urška and Lukežič, Tadeja and Podgoršek, Ajda and Horvat, Jaka and Polak, Tomaž and Šala, Martin and Jenko, Branko and Harmrolfs, Kirsten and Ocampo-Sosa, Alain and Martínez-Martínez, Luis and Herron, Paul R. and Fujs, Štefan and Kosec, Gregor and Hunter, Iain S. and Müller, Rolf and Petković, Hrvoje (2015) Construction of a new class of tetracycline lead structures with potent antibacterial activity through biosynthetic engineering. Angewandte Chemie International Edition, 54 (13). pp. 3937-3940. ISSN 1433-7851

Tomb, Rachael M and MacLean, Michelle and Herron, Paul R and Hoskisson, Paul A and MacGregor, Scott J and Anderson, John G (2014) Inactivation of Streptomyces phage ɸC31 by 405 nm light : requirement for exogenous photosensitizers? Bacteriophage, 4 (3). e32129. ISSN 2159-7081

Lukežič, Tadeja and Lešnik, Urška and Podgoršek, Ajda and Horvat, Jaka and Polak, Tomaž and Šala, Martin and Jenko, Branko and Raspor, Peter and Herron, Paul R and Hunter, Iain S and Petković, Hrvoje (2013) Identification of the chelocardin biosynthetic gene cluster from Amycolatopsis sulphurea : a platform for producing novel tetracycline antibiotics. Microbiology, 159 (12). pp. 2524-2532. ISSN 1350-0872

Smith, Margaret C M and Hendrix, Roger W and Dedrick, Rebekah and Mitchell, Kaitlin and Ko, Ching-Chung and Russell, Daniel and Bell, Emma and Gregory, Matthew and Bibb, Maureen J and Pethick, Florence and Jacobs-Sera, Deborah and Herron, Paul and Buttner, Mark J and Hatfull, Graham F (2013) Evolutionary relationships among actinophages and a putative adaptation for growth in Streptomyces spp. Journal of Bacteriology, 195 (21). pp. 4924-4935. ISSN 1098-5530

Reumerman, Richard A and Tucker, Nicholas P and Herron, Paul R and Hoskisson, Paul A and Sangal, Vartul (2013) Tool for rapid annotation of microbial SNPs (TRAMS) : a simple program for rapid annotation of genomic variation in prokaryotes. Antonie van Leeuwenhoek: International Journal of General and Molecular Microbiology, 104 (3). pp. 431-434. ISSN 0003-6072

Pethick, Florence and MacFadyen, Alison and Tang, Zhenyu and Sangal, Vartul and Liu, Tze-Tze and Chu, Ju and Kosec, Gregor and Petkovic, H. and Meijin, Guo and Kirby, R. and Hoskisson, Paul and Herron, Paul and Hunter, Iain (2013) Draft genome sequence of the oxytetracycline-producing bacterium streptomyces rimosus ATCC 10970. Genome Announcements, 1 (2). e00063-13. ISSN 2169-8287

Paradzik, Tina and Ivic, Nives and Filic, Zelimira and Manjasetty, Babu and Herron, Paul and Luic, Marija and Vujaklija, Dusica (2013) Structure–function relationships of two paralogous single-stranded DNA-binding proteins from Streptomyces coelicolor : implication of SsbB in chromosome segregation during sporulation. Nucleic Acids Research, 41 (6). pp. 3659-3672. ISSN 0305-1048

Kirby, Ralph and Sangal, Vartul and Tucker, Nicholas and Zakrzewska-Czerwinska, Jolanta and Wierzbicka, K and Herron, Paul and Chu, C-J and Chandra, G. and Fahal, Ahmed and Goodfellow, Michael and Hoskisson, Paul (2012) Draft genome sequence of the human pathogen streptomyces somaliensis, a significant cause of actinomycetoma. Journal of Bacteriology, 194 (13). pp. 3544-3545. ISSN 1098-5530

Tang, Zhenyu and Herron, Paul R. and Hunter, Iain S. and Zhang, Siliang and Guo, Meijin (2012) Insight into microevolution of Streptomyces rimosus based on analysis of zwf and rex genes. African Journal of Microbiology Research, 6 (24). pp. 5229-5236. ISSN 1996-0808

Jyothikumar, Vinod and Klanbut, Khanungkan and Tiong, John and Roxburgh, James S. and Hunter, Iain S. and Smith, Terry K. and Herron, Paul R. (2012) Cardiolipin synthase is required for Streptomyces coelicolor morphogenesis. Molecular Microbiology, 84 (1). pp. 181-197. ISSN 0950-382X

Tang, Zhenyu and Zhuang, Yingping and Chu, Ju and Zhang, Siliang and Herron, Paul and Hunter, Iain S. and Guo, Meijin (2011) A molecular redox sensor from streptomyces rimosus M4018 for escherichia coli. African Journal of Microbiology Research, 5 (31). pp. 5682-5688. ISSN 1996-0808

Tang, Zhenyu and Xiao, Ciying and Zhuang, Yingping and Chu, Ju and Zhang, Siliang and Herron, Paul and Hunter, Iain and Meijin, Guo (2011) Improved oxytetracycline production in Streptomyces rimosus M4018 by metabolic engineering of the G6PDH gene in the pentose phosphate pathway. Enzyme and Microbial Technology, 49 (1). pp. 17-24. ISSN 0141-0229

Wolánski, Marcin and Wali, Rashmi and Tilley, Emma and Jakimowicz, Dagmara and Zakrzewska-Czerwinska, Jolanta and Herron, Paul (2011) Replisome trafficking in growing vegetative hyphae of Streptomyces coelicolor A3(2). Journal of Bacteriology, 193 (5). pp. 1273-1275.

Fernández-Martínez, L T and Del Sol, R. and Evans, M.C. and Fielding, S. and Herron, P R and Chandra, G. and Dyson, P.J. (2011) A transposon insertion single-gene knockout library and new ordered cosmid library for the model organism Streptomyces coelicolor A3(2). Antonie van Leeuwenhoek: International Journal of General and Molecular Microbiology, 99 (3). pp. 515-522. ISSN 0003-6072

Kirby, Ralph and Herron, Paul and Hoskisson, Paul (2011) Analysis of developmental gene conservation in the Actinomycetales using DNA/DNA microarray comparisons. Antonie van Leeuwenhoek, 99 (2). pp. 159-177.

Jyothikumar, Vinod and Tilley, Emma J. and Wali, Rashmi and Herron, Paul R. (2008) Time lapse microscopy of Streptomyces coelicolor growth and sporulation. Applied and Environmental Microbiology, 74 (21). pp. 6774-6781. ISSN 0099-2240

Kirby, R. and Gan, T. and Hunter, I.S. and Herron, P.R. and Tilley, E.J.F. (2008) The genome of streptomyces rimosus subsp. rimosus shows a novel structure compared to other streptomyces using DNA/DNA microarray analysis. Antonie van Leeuwenhoek, 94 (2). pp. 173-186. ISSN 0003-6072

Bishop, A. and Fielding, S. and Dyson, P.J. and Herron, P.R. (2004) Systematic insertional mutagenesis of a streptomycete genome: a link between osmoadaptation and antibiotic production. Genome Research, 14. pp. 893-900. ISSN 1088-9051

Herron, P.R. and Hughes, G. and Chandra, G. and Fielding, S. and Dyson, P.J. (2004) Transposon express, a software application to report the identity of insertions obtained by comprehensive transposon mutagenesis of sequenced genomes: analysis of the preference for in vitro tn5 transposition into gC-rich dNA. Nucleic Acids Research, 32 (14). E113. ISSN 0305-1048

Del Sol, R. and Pitman, A. and Herron, P.R. and Dyson, P.J. (2003) The product of a developmental gene, Crga, that coordinates reproductive growth in streptomyces belongs to a novel family of small actinomycete-specific proteins. Journal of Bacteriology, 185 (22). pp. 6678-6685. ISSN 1098-5530

Ali, Nasima and Herron, Paul R. and Evans, Meirwyn C. and Dyson, Paul J. (2002) Osmotic regulation of the streptomyces lividans thiostrepton-inducible promoter, ptipA. Microbiology, 148 (2). pp. 381-390. ISSN 1350-0872

This list was generated on Fri Mar 29 03:04:38 2024 GMT.