Browse by Journal or other publication

2024

McCready, Connaire and Sladekova, Kristina and Conroy, Stuart and Gomes, José R. B. and Fletcher, Ashleigh J. and Jorge, Miguel (2024) Quantifying the uncertainty of force field selection on adsorption predictions in MOFs. Journal of Chemical Theory and Computation, 20 (11). pp. 4869-4884. ISSN 1549-9618

2023

Jorge, Miguel and Barrera, Maria Cecilia and Milne, Andrew W. and Ringrose, Chris and Cole, Daniel J. (2023) What is the optimal dipole moment for non-polarizable models of liquids? Journal of Chemical Theory and Computation, 19 (6). pp. 1790-1804. ISSN 1549-9618

Cordina, Robert J. and Smith, Beccy and Tuttle, Tell (2023) COGITO : a coarse-grained force field for the simulation of macroscopic properties of triacylglycerides. Journal of Chemical Theory and Computation, 19 (4). pp. 1333-1341. ISSN 1549-9618

2021

Fowles, Daniel J. and Palmer, David S. and Guo, Rui and Price, Sarah L. and Mitchell, John B. O. (2021) Towards physics-based solubility computation for pharmaceuticals to rival informatics. Journal of Chemical Theory and Computation, 17 (6). pp. 3700-3709. ISSN 1549-9618

van Teijlingen, Alexander and Tuttle, Tell (2021) Beyond tripeptides - two-step active machine learning for very large datasets. Journal of Chemical Theory and Computation, 17 (5). pp. 3221-3232. ISSN 1549-9618

2020

Bonafé, Franco P. and Aradi, Bálint and Hourahine, Ben and Medrano, Carlos R. and Hernández, Federico J. and Frauenheim, Thomas and Sánchez, Cristián G. (2020) A real-time time-dependent density functional tight-binding implementation for semiclassical excited state electron-nuclear dynamics and pump-probe spectroscopy simulations. Journal of Chemical Theory and Computation, 16 (7). pp. 4454-4469. ISSN 1549-9618

Dantanarayana, Varuni and Nematiaram, Tahereh and Vong, Daniel and Anthony, John E. and Troisi, Alessandro and Nguyen Cong, Kien and Goldman, Nir and Faller, Roland (2020) Predictive model of charge mobilities in organic semiconductor small molecules with force-matched potentials. Journal of Chemical Theory and Computation, 16 (6). 3494–3503. ISSN 1549-9618

2018

Milne, Andrew W. and Jorge, Miguel (2018) Polarisation corrections and the hydration free energy of water. Journal of Chemical Theory and Computation. ISSN 1549-9618

2017

Berg, Andrej and Peter, Christine and Johnston, Karen (2017) Evaluation and optimisation of interface force fields for water on gold surfaces. Journal of Chemical Theory and Computation. ISSN 1549-9618

2013

Palmer, David and Sørensen, Jesper Givskov J.G. and Schiøtt, Birgit B. and Fedorov, Maxim V. M.V. (2013) Solvent binding analysis and computational alanine scanning of the bovine chymosin-bovine κ-casein complex using molecular integral equation theory. Journal of Chemical Theory and Computation, 9 (12). pp. 5706-5717. ISSN 1549-9618

2012

Palmer, David and McDonagh, James L and Mitchell, John B.O. and van Mourik, Tanja and Fedorov, Maxim (2012) First principles calculation of the intrinsic aqueous solubility of crystalline druglike molecules. Journal of Chemical Theory and Computation, 8 (9). 3322–3337. ISSN 1549-9618

Sergiievskyi, Volodymyr P. and Fedorov, Maxim V. (2012) 3DRISM multigrid algorithm for fast solvation free energy calculations. Journal of Chemical Theory and Computation, 8 (6). pp. 2062-2070. ISSN 1549-9618

2011

Ratkova, Ekaterina L. and Fedorov, Maxim V. (2011) Combination of RISM and cheminformatics for efficient predictions of hydration free energy of polyfragment molecules : application to a set of organic pollutants. Journal of Chemical Theory and Computation, 7 (5). pp. 1450-1457. ISSN 1549-9618

Jensen, Frank and Palmer, David S. (2011) Harmonic vibrational analysis in delocalized internal coordinates. Journal of Chemical Theory and Computation, 7 (1). pp. 223-230.

2010

Jorge, Miguel and Garrido, Nuno M. and Queimada, Antonio J. and Economou, Ioannis G. and Macedo, Eugenia A. (2010) Effect of the integration method on the accuracy and computational efficiency of free energy calculations using thermodynamic integration. Journal of Chemical Theory and Computation, 6 (4). pp. 1018-1027. ISSN 1549-9618

2009

Garrido, Nuno M. and Queimada, Antonio J. and Jorge, Miguel and Macedo, Eugenia A. and Economou, Ioannis G. (2009) 1-Octanol/water partition coefficients of n-alkanes from molecular simulations of absolute solvation free energies. Journal of Chemical Theory and Computation, 5 (9). pp. 2436-2446. ISSN 1549-9618