CSGID solves structures and identifies phenotypes for five enzymes in Toxoplasma gondii

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Lykins, Joseph D. and Filippova, Ekaterina V. and Halavaty, Andrei S. and Minasova, George and Zhou, Ying and Dubrovska, Ievgeniia and Flores, Kristin J. and Shuvalova, Ludmilla A. and Ruan, Jiapeng and El Bissati, Kamal and Dovgin, Sarah and Roberts, Craig W. and Woods, Stuart and Moulton, Jon D. and Moulton, Hong and McPhillie, Martin J. and Muench, Stephen P. and Fishwick, Colin W. G. and Sabini, Elisabetta and Shanmugam, Dhanasekaran and Roos, David S. and McLeod, Rima and Anderson, Wayne F. and Ngô, Huân M (2018) CSGID solves structures and identifies phenotypes for five enzymes in Toxoplasma gondii. Frontiers in Cellular and Infection Microbiology : Parasite and Host, 8. 352. (https://doi.org/10.3389/fcimb.2018.00352)

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Abstract

Toxoplasma gondii, an Apicomplexan parasite, causes significant morbidity and mortality, including severe disease in immunocompromised hosts and devastating congenital disease, with no effective treatment for the bradyzoite stage. To address this, we used the Tropical Disease Research database, crystallography, molecular modeling, and antisense to identify and characterize a range of potential therapeutic targets for toxoplasmosis. Phosphoglycerate mutase II (PGMII), nucleoside diphosphate kinase (NDK), ribulose phosphate 3-epimerase (RPE), ribose-5-phosphate isomerase (RPI), and ornithine aminotransferase (OAT) were structurally characterized. Crystallography revealed insights into the overall structure, protein oligomeric states and molecular details of active sites important for ligand recognition. Literature and molecular modeling suggested potential inhibitors and druggability. The targets were further studied with vivoPMO to interrupt enzyme synthesis, identifying the targets as potentially important to parasitic replication and, therefore, of therapeutic interest. Targeted vivoPMO resulted in statistically significant perturbation of parasite replication without concomitant host cell toxicity, consistent with a previous CRISPR/Cas9 screen showing PGM, RPE, and RPI contribute to parasite fitness. PGM, RPE, and RPI have the greatest promise for affecting replication in tachyzoites. These targets are shared between other medically important parasites and may have wider therapeutic potential.

ORCID iDs

Lykins, Joseph D., Filippova, Ekaterina V., Halavaty, Andrei S., Minasova, George, Zhou, Ying, Dubrovska, Ievgeniia, Flores, Kristin J., Shuvalova, Ludmilla A., Ruan, Jiapeng, El Bissati, Kamal, Dovgin, Sarah, Roberts, Craig W. ORCID logoORCID: https://orcid.org/0000-0002-0653-835X, Woods, Stuart ORCID logoORCID: https://orcid.org/0000-0002-3798-2074, Moulton, Jon D., Moulton, Hong, McPhillie, Martin J., Muench, Stephen P., Fishwick, Colin W. G., Sabini, Elisabetta, Shanmugam, Dhanasekaran, Roos, David S., McLeod, Rima, Anderson, Wayne F. and Ngô, Huân M;
CORE (COnnecting REpositories)