Biomolecular condensates formed by designer minimalistic peptides

Baruch Leshem, Avigail and Sloan-Dennison, Sian and Massarano, Tlalit and Ben-David, Shavit and Graham, Duncan and Faulds, Karen and Gottlieb, Hugo E. and Chill, Jordan H. and Lampel, Ayala (2023) Biomolecular condensates formed by designer minimalistic peptides. Nature Communications, 14 (1). 421. ISSN 2041-1723 (https://doi.org/10.1038/s41467-023-36060-8)

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Abstract

Inspired by the role of intracellular liquid-liquid phase separation (LLPS) in formation of membraneless organelles, there is great interest in developing dynamic compartments formed by LLPS of intrinsically disordered proteins (IDPs) or short peptides. However, the molecular mechanisms underlying the formation of biomolecular condensates have not been fully elucidated, rendering on-demand design of synthetic condensates with tailored physico-chemical functionalities a significant challenge. To address this need, here we design a library of LLPS-promoting peptide building blocks composed of various assembly domains. We show that the LLPS propensity, dynamics, and encapsulation efficiency of compartments can be tuned by changes to the peptide composition. Specifically, with the aid of Raman and NMR spectroscopy, we show that interactions between arginine and aromatic amino acids underlie droplet formation, and that both intra- and intermolecular interactions dictate droplet dynamics. The resulting sequence-structure-function correlation could support the future development of compartments for a variety of applications.

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