Draft genome sequences of three chemically rich actinomycetes isolated from Mediterranean sponges
Horn, Hannes and Cheng, Cheng and Edrada-Ebel, RuAngelie and Hentschel, Ute and Abdelmohsen, Usama Ramadan (2015) Draft genome sequences of three chemically rich actinomycetes isolated from Mediterranean sponges. Marine Genomics, 24. pp. 285-287. ISSN 1876-7478
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Abstract
Metabolomic analysis has shown the chemical richness of the sponge-associated actinomycetes. Streptomyces sp. SBT349,. Nonomureae sp. SBT364, and. Nocardiopsis sp. SBT366. The genomes of these actinomycetes were sequenced and the genomic potential for secondary metabolism was evaluated. Their draft genomes have sizes of 8.0, 10, and 5.8. Mb having 687, 367, and 179 contigs with a GC content of 71.6, 70.7, and 72.7%, respectively. Moreover, antiSMASH 3.0 predicted 108, 149, and 75 secondary metabolite gene clusters, respectively which highlight the metabolic capacity of the three actinomycete species to produce diverse classes of natural products.
Item type: Article ID code: 55245 Dates: DateEvent1 December 2015Published20 October 2015Published Online8 October 2015AcceptedKeywords: actinomycetes, Mediterranean sponges, secondary metabolism, draft genome, metabolic capacity, Other systems of medicine, Oceanography, Aquatic Science, Genetics Subjects: Medicine > Other systems of medicine
Geography. Anthropology. Recreation > OceanographyDepartment: Faculty of Science > Strathclyde Institute of Pharmacy and Biomedical Sciences Depositing user: Pure Administrator Date deposited: 05 Jan 2016 14:33 Last modified: 08 Jun 2021 00:28 Related URLs: URI: https://strathprints.strath.ac.uk/id/eprint/55245
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