Strathprints logo
Strathprints Home | Open Access | Browse | Search | User area | Copyright | Help | Library Home | SUPrimo

Methane monooxygenase gene expression mediated by methanobactin in the presence of mineral copper sources

Knapp, Charles W. and Fowle, David A. and Kulczycki, Ezra and Roberts, Jennifer A. and Graham, David W. (2007) Methane monooxygenase gene expression mediated by methanobactin in the presence of mineral copper sources. Proceedings of the National Academy of Sciences, 104 (29). pp. 12040-12045. ISSN 1091-6490

Full text not available in this repository. (Request a copy from the Strathclyde author)

Abstract

Methane is a major greenhouse gas linked to global warming; however, patterns of in situ methane oxidation by methane-oxidizing bacteria (methanotrophs), nature's main biological mechanism for methane suppression, are often inconsistent with laboratory predictions. For example, one would expect a strong relationship between methanotroph ecology and Cu level because methanotrophs require Cu to sustain particulate methane monooxygenase (pMMO), the most efficient enzyme for methane oxidation. However, no correlation has been observed in nature, which is surprising because methane moncloxygenase (MMO) gene expression has been unequivocally linked to Cu availability. Here we provide a fundamental explanation for this lack of correlation. We propose that MMO expression in nature is largely controlled by solid-phase Cu geochemistry and the relative ability of Cu acquisition systems in methanotrophs, such as methanobactins (mb), to obtain Cu from mineral sources. To test this hypothesis, RT-PCR expression assays were developed for Methylosinus trichosporium OB3b (which produces mb) to quantify pMMO, soluble MMO (the alternate MMO expressed when Cu is ''unavailable''), and 16SrRNA gene expression under progressively more stringent Cu supply conditions. When Cu was provided as CUC12, pMMO transcript levels increased significantly consistent with laboratory work. However, when Cu was provided as Cu-cloped iron oxide, pMMO transcript levels increased only when mb was also present. Finally, when Cu was provided as Cu-cloped borosilicate glass, pMMO transcription patterns varied depending on the ambient mb:Cu supply ratio. Cu geochemistry clearly influences MMO expression in terrestrial systems, and, as such, local Cu mineralogy might provide an explanation for methane oxidation patterns in the natural environment.

Item type: Article
ID code: 16342
Keywords: methanotroph, bioweathering, methane oxidation, particulate methane, monooxygenase, real-time RT-PCR, Science (General), Geology, Microbiology, General
Subjects: Science > Science (General)
Science > Geology
Science > Microbiology
Department: Faculty of Engineering > Civil and Environmental Engineering
Related URLs:
Depositing user: Dr Charles W Knapp
Date Deposited: 05 Mar 2010 10:24
Last modified: 03 Jul 2014 16:31
URI: http://strathprints.strath.ac.uk/id/eprint/16342

Actions (login required)

View Item